RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 DEPTORQ8TB45 409 aa24.46■■□□□ 1.51
UBA3-206ENST00000464605 MRPS27Q92552 414 aaKnown RBP24.46■■□□□ 1.51
UBA3-206ENST00000464605 PABPC5Q96DU9 382 aaKnown RBP24.46■■□□□ 1.51
UBA3-206ENST00000464605 NXF3Q9H4D5 531 aaKnown RBP24.46■■□□□ 1.51
UBA3-206ENST00000464605 BLOC1S4Q9NUP1 217 aa24.46■■□□□ 1.51
UBA3-206ENST00000464605 SPG21Q9NZD8 308 aa24.46■■□□□ 1.51
UBA3-206ENST00000464605 DNAJB4Q9UDY4 337 aa24.46■■□□□ 1.51
UBA3-206ENST00000464605 NT5C1B-RDH14C9J2C7 533 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 DDHD2O94830 711 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 NPTXRO95502 500 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 PRKCBP05771 671 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 LTBRP36941 435 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 NPTX2P47972 431 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 PEX3P56589 373 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 KARSQ15046 597 aaKnown RBP24.45■■□□□ 1.5
UBA3-206ENST00000464605 LEXMQ3ZCV2 418 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 TMEM173Q86WV6 379 aaPredicted RBP24.45■■□□□ 1.5
UBA3-206ENST00000464605 CDK5RAP3Q96JB5 506 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 CCSER1Q9C0I3 900 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 PDZD7Q9H5P4 517 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 TLR9Q9NR96 1032 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 MIOSQ9NXC5 875 aa24.45■■□□□ 1.5
UBA3-206ENST00000464605 SRPRBQ9Y5M8 271 aaKnown RBP24.45■■□□□ 1.5
UBA3-206ENST00000464605 MORC2Q9Y6X9 1032 aaPredicted RBP24.45■■□□□ 1.5
UBA3-206ENST00000464605 SFI1A8K8P3 1242 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 GALTP07902 379 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 PPM1AP35813 382 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 EFNA5P52803 228 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 CEBPZQ03701 1054 aaKnown RBP24.44■■□□□ 1.5
UBA3-206ENST00000464605 PRPF4BQ13523 1007 aaKnown RBP24.44■■□□□ 1.5
UBA3-206ENST00000464605 NT5DC1Q5TFE4 455 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 TAS1R3Q7RTX0 852 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 GSTCDQ8NEC7 633 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 EPSTI1Q96J88 318 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 DRC1Q96MC2 740 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 CLIC6Q96NY7 704 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 GAD1Q99259 594 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 TIPINQ9BVW5 301 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 UBN1Q9NPG3 1134 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 ARHGAP28Q9P2N2 729 aa24.44■■□□□ 1.5
UBA3-206ENST00000464605 ARL5CA6NH57 179 aa24.43■■□□□ 1.5
UBA3-206ENST00000464605 ZC3H11AO75152 810 aaKnown RBP eCLIP24.43■■□□□ 1.5
UBA3-206ENST00000464605 POMCP01189 267 aa24.43■■□□□ 1.5
UBA3-206ENST00000464605 SSBP05455 408 aaKnown RBP eCLIP24.43■■□□□ 1.5
UBA3-206ENST00000464605 KCNA5P22460 613 aa24.43■■□□□ 1.5
UBA3-206ENST00000464605 ALDH7A1P49419 539 aaKnown RBP24.43■■□□□ 1.5
UBA3-206ENST00000464605 RAD51AP2Q09MP3 1159 aa24.43■■□□□ 1.5
UBA3-206ENST00000464605 SLC39A14Q15043 492 aa24.43■■□□□ 1.5
UBA3-206ENST00000464605 SPECC1Q5M775 1068 aa24.43■■□□□ 1.5
UBA3-206ENST00000464605 EEF1DP3Q658K8 133 aa24.43■■□□□ 1.5
UBA3-206ENST00000464605 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.43■■□□□ 1.5
UBA3-206ENST00000464605 BCL7CQ8WUZ0 217 aaPredicted RBP24.43■■□□□ 1.5
UBA3-206ENST00000464605 CALML4Q96GE6 196 aa24.43■■□□□ 1.5
UBA3-206ENST00000464605 ZFP42Q96MM3 310 aa24.43■■□□□ 1.5
UBA3-206ENST00000464605 NTPCRQ9BSD7 190 aaKnown RBP24.43■■□□□ 1.5
UBA3-206ENST00000464605 C17orf75Q9HAS0 396 aa24.43■■□□□ 1.5
UBA3-206ENST00000464605 KCND2Q9NZV8 630 aa24.43■■□□□ 1.5
UBA3-206ENST00000464605 KANSL3Q9P2N6 904 aa24.43■■□□□ 1.5
UBA3-206ENST00000464605 CITO14578 2027 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 NPHP3-ACAD11A0A0J9YXS1 232 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 LINC01565O15544 149 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 NCK2O43639 380 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 PLCG1P19174 1290 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 AKAP5P24588 427 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 MLH1P40692 756 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 SLC11A1P49279 550 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 DLX2Q07687 328 aaPredicted RBP24.42■■□□□ 1.5
UBA3-206ENST00000464605 ADAM15Q13444 863 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 URGCPQ8TCY9 931 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 APOL6Q9BWW8 343 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 TRIM6Q9C030 488 aaPredicted RBP24.42■■□□□ 1.5
UBA3-206ENST00000464605 GBP3Q9H0R5 595 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 TMEM134Q9H6X4 195 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 GIT1Q9Y2X7 761 aa24.42■■□□□ 1.5
UBA3-206ENST00000464605 CCDC169A6NNP5 214 aa24.41■■□□□ 1.5
UBA3-206ENST00000464605 K7ERI5 159 aa24.41■■□□□ 1.5
UBA3-206ENST00000464605 N4BP3O15049 544 aa24.41■■□□□ 1.5
UBA3-206ENST00000464605 LIG1P18858 919 aa24.41■■□□□ 1.5
UBA3-206ENST00000464605 NASPP49321 788 aaPredicted RBP24.41■■□□□ 1.5
UBA3-206ENST00000464605 RNASELQ05823 741 aaKnown RBP24.41■■□□□ 1.5
UBA3-206ENST00000464605 PDE12Q6L8Q7 609 aaKnown RBP24.41■■□□□ 1.5
UBA3-206ENST00000464605 RAD54LQ92698 747 aa24.41■■□□□ 1.5
UBA3-206ENST00000464605 IGSF21Q96ID5 467 aa24.41■■□□□ 1.5
UBA3-206ENST00000464605 IGFLR1Q9H665 355 aa24.41■■□□□ 1.5
UBA3-206ENST00000464605 CLDND1Q9NY35 253 aa24.41■■□□□ 1.5
UBA3-206ENST00000464605 PUF60Q9UHX1 559 aaKnown RBP24.41■■□□□ 1.5
UBA3-206ENST00000464605 NRIP1P48552 1158 aa24.4■■□□□ 1.5
UBA3-206ENST00000464605 SCNN1GP51170 649 aa24.4■■□□□ 1.5
UBA3-206ENST00000464605 KRT17Q04695 432 aa24.4■■□□□ 1.5
UBA3-206ENST00000464605 DSC1Q08554 894 aa24.4■■□□□ 1.5
UBA3-206ENST00000464605 DMP1Q13316 513 aaPredicted RBP24.4■■□□□ 1.5
UBA3-206ENST00000464605 PKP1Q13835 747 aa24.4■■□□□ 1.5
UBA3-206ENST00000464605 MCM6Q14566 821 aa24.4■■□□□ 1.5
UBA3-206ENST00000464605 COLGALT2Q8IYK4 626 aa24.4■■□□□ 1.5
UBA3-206ENST00000464605 MICAL1Q8TDZ2 1067 aa24.4■■□□□ 1.5
UBA3-206ENST00000464605 SPIRE2Q8WWL2 714 aa24.4■■□□□ 1.5
UBA3-206ENST00000464605 TMEM175Q9BSA9 504 aa24.4■■□□□ 1.5
UBA3-206ENST00000464605 VN1R3Q9BXE9 311 aa24.4■■□□□ 1.5
UBA3-206ENST00000464605 KMT5AQ9NQR1 393 aa24.4■■□□□ 1.5
UBA3-206ENST00000464605 ZMYM2Q9UBW7 1377 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms