RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 PRPHP41219 470 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 TECP42680 631 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 RNASELQ05823 741 aaKnown RBP13.2□□□□□ -0.3
RTCB-202ENST00000463455 MBTD1Q05BQ5 628 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 CAPSQ13938 189 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 ZNF174Q15697 407 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 AMHR2Q16671 573 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 PLPP4Q5VZY2 271 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 CDCA2Q69YH5 1023 aaPredicted RBP13.2□□□□□ -0.3
RTCB-202ENST00000463455 AGMOQ6ZNB7 445 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 TMC7Q7Z402 723 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 DDX53Q86TM3 631 aaKnown RBP13.2□□□□□ -0.3
RTCB-202ENST00000463455 RBM23Q86U06 439 aaKnown RBP13.2□□□□□ -0.3
RTCB-202ENST00000463455 KCTD17Q8N5Z5 321 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 TMEM175Q9BSA9 504 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 CSRNP2Q9H175 543 aa13.2□□□□□ -0.3
RTCB-202ENST00000463455 POLR3FQ9H1D9 316 aaPredicted RBP13.2□□□□□ -0.3
RTCB-202ENST00000463455 USO1O60763 962 aaKnown RBP13.19□□□□□ -0.3
RTCB-202ENST00000463455 MED24O75448 989 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 CSPG5O95196 566 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 GALTP07902 379 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 PPP2R5AQ15172 486 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 FAM187BQ17R55 369 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 RILPL1Q5EBL4 403 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 C4orf32Q8N8J7 132 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 MRPL43Q8N983 215 aaKnown RBP13.19□□□□□ -0.3
RTCB-202ENST00000463455 IGSF22Q8N9C0 903 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 ASAP3Q8TDY4 903 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 LPPQ93052 612 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 IGSF21Q96ID5 467 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 TMX3Q96JJ7 454 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 C2orf40Q9H1Z8 148 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 NRDE2Q9H7Z3 1164 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 CD320Q9NPF0 282 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 PRMT7Q9NVM4 692 aaPredicted RBP13.19□□□□□ -0.3
RTCB-202ENST00000463455 GIT1Q9Y2X7 761 aa13.19□□□□□ -0.3
RTCB-202ENST00000463455 A0A1B0GUA9 196 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 ARHGEF35A5YM69 484 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 C2orf71A6NGG8 1288 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 MEIS3P2A8K0S8 358 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 CTSAP10619 480 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 ITGA4P13612 1032 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 ARF4P18085 180 aaPredicted RBP13.18□□□□□ -0.3
RTCB-202ENST00000463455 CYP11B2P19099 503 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 PBX3P40426 434 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 NAMPTP43490 491 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 TMEM31Q5JXX7 168 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 SLC27A1Q6PCB7 646 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 POTEGQ6S5H5 508 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 ZBTB8OSQ8IWT0 167 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 SMG8Q8ND04 991 aaKnown RBP13.18□□□□□ -0.3
RTCB-202ENST00000463455 SUSD6Q92537 303 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 CASP10Q92851 521 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 TBC1D32Q96NH3 1257 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 ZBP1Q9H171 429 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 BARX2Q9UMQ3 279 aaPredicted RBP13.18□□□□□ -0.3
RTCB-202ENST00000463455 INPP5FQ9Y2H2 1132 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 ARIH1Q9Y4X5 557 aaPredicted RBP13.18□□□□□ -0.3
RTCB-202ENST00000463455 IPPQ9Y573 584 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 PCDHGC5Q9Y5F6 944 aa13.18□□□□□ -0.3
RTCB-202ENST00000463455 PHLPP2Q6ZVD8 1323 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 LRRIQ4A6NIV6 560 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 PER2O15055 1255 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 DCXO43602 365 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 ALDH2P05091 517 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 CCT6AP40227 531 aaKnown RBP13.17□□□□□ -0.3
RTCB-202ENST00000463455 TOB1P50616 345 aaPredicted RBP13.17□□□□□ -0.3
RTCB-202ENST00000463455 PTGDRQ13258 359 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 CAMK2BQ13554 666 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 CLUL1Q15846 466 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 TPRNQ4KMQ1 711 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 PADI6Q6TGC4 694 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 VPS52Q8N1B4 723 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 VN1R2Q8NFZ6 395 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 KIFAP3Q92845 792 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
RTCB-202ENST00000463455 PHF7Q9BWX1 381 aaPredicted RBP13.17□□□□□ -0.3
RTCB-202ENST00000463455 TRIM6Q9C030 488 aaPredicted RBP13.17□□□□□ -0.3
RTCB-202ENST00000463455 FZD8Q9H461 694 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 EPHX3Q9H6B9 360 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.17□□□□□ -0.3
RTCB-202ENST00000463455 DZANK1Q9NVP4 752 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 LRWD1Q9UFC0 647 aa13.17□□□□□ -0.3
RTCB-202ENST00000463455 USP15Q9Y4E8 981 aaPredicted RBP13.17□□□□□ -0.3
RTCB-202ENST00000463455 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
RTCB-202ENST00000463455 HIDE1A8MVS5 230 aa13.16□□□□□ -0.3
RTCB-202ENST00000463455 NR1I2O75469 434 aa13.16□□□□□ -0.3
RTCB-202ENST00000463455 SLC11A1P49279 550 aa13.16□□□□□ -0.3
RTCB-202ENST00000463455 EFNA5P52803 228 aa13.16□□□□□ -0.3
RTCB-202ENST00000463455 ITIH3Q06033 890 aa13.16□□□□□ -0.3
RTCB-202ENST00000463455 DSC1Q08554 894 aa13.16□□□□□ -0.3
RTCB-202ENST00000463455 CBX2Q14781 532 aaPredicted RBP13.16□□□□□ -0.3
RTCB-202ENST00000463455 ANKRD54Q6NXT1 300 aa13.16□□□□□ -0.3
RTCB-202ENST00000463455 PPFIBP1Q86W92 1011 aa13.16□□□□□ -0.3
RTCB-202ENST00000463455 GPR65Q8IYL9 337 aa13.16□□□□□ -0.3
RTCB-202ENST00000463455 KHSRPQ92945 711 aaKnown RBP eCLIP13.16□□□□□ -0.3
RTCB-202ENST00000463455 EIF2AQ9BY44 585 aaKnown RBP13.16□□□□□ -0.3
RTCB-202ENST00000463455 SSX2IPQ9Y2D8 614 aa13.16□□□□□ -0.3
RTCB-202ENST00000463455 FAN1Q9Y2M0 1017 aa13.16□□□□□ -0.3
RTCB-202ENST00000463455 PCDHB6Q9Y5E3 794 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms