RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 TSPY2A6NKD2 308 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 RAD51CO43502 376 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 MTA2O94776 668 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 LUC7L3O95232 432 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 FERP16591 822 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 ECHS1P30084 290 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 EPHX2P34913 555 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 EIF4A3P38919 411 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 MAGEA1P43355 309 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 CCNG1P51959 295 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 CLDN10P78369 228 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 TFAP4Q01664 338 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 MAP3K10Q02779 954 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 EARS2Q5JPH6 523 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 FAM47AQ5JRC9 791 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 CWF19L1Q69YN2 538 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 TATDN1Q6P1N9 297 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 PIGWQ7Z7B1 504 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 RELL1Q8IUW5 271 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 MFN1Q8IWA4 741 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 DRAXINQ8NBI3 349 aaPredicted RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 IQCDQ96DY2 449 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 TEPSINQ96N21 525 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 NOX5Q96PH1 765 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 XPO6Q96QU8 1125 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 ERGIC2Q96RQ1 377 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 UBAC1Q9BSL1 405 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 MOV10L1Q9BXT6 1211 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 DEFB129Q9H1M3 183 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 DNAJC18Q9H819 358 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 CNOT10Q9H9A5 744 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 TCP11L1Q9NUJ3 509 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 HERC5Q9UII4 1024 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 TRPM7Q96QT4 1865 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 hCG_1984214I3L0E3 225 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 OATP04181 439 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 TSPY3P0CV98 308 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 TSPY8P0CW00 308 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 CD46P15529 392 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 NQO1P15559 274 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 PAPOLAP51003 745 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 MAGOHP61326 146 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 EHHADHQ08426 723 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 CUL1Q13616 776 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 SEC23AQ15436 765 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 ZNF174Q15697 407 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 TTI2Q6NXR4 508 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 CMTR1Q8N1G2 835 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 MAGOHBQ96A72 148 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 MTMR8Q96EF0 704 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 TRIM47Q96LD4 638 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 ZNF317Q96PQ6 595 aaPredicted RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 ZSCAN10Q96SZ4 725 aaPredicted RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 ZKSCAN3Q9BRR0 538 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 CENPOQ9BU64 300 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 FAM129AQ9BZQ8 928 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 NGRNQ9NPE2 291 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 GGA3Q9NZ52 723 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 SIRPGQ9P1W8 387 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 ZFATQ9P243 1243 aa9.38□□□□□ -0.91
SHQ1-203ENST00000463369 SCAF8Q9UPN6 1271 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 BAZ2BQ9UIF8 2168 aaKnown RBP9.38□□□□□ -0.91
SHQ1-203ENST00000463369 OTOFQ9HC10 1997 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 PLIN4Q96Q06 1357 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 DCDC2CA8MYV0 355 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 STXBP3O00186 592 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 WNT7AO00755 349 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 PSMA7O14818 248 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 AKR1B10O60218 316 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 SLURP2P0DP57 97 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 ATP4AP20648 1035 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 KRT2P35908 639 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 ETFBP38117 255 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 CASP2P42575 452 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 ERVK-9P63128 1117 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 TNNC1P63316 161 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 ATP2C1P98194 919 aaPredicted RBP9.37□□□□□ -0.91
SHQ1-203ENST00000463369 HLTFQ14527 1009 aaKnown RBP eCLIP9.37□□□□□ -0.91
SHQ1-203ENST00000463369 TBC1D25Q3MII6 688 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 ALFQ53S48 1182 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 CCDC178Q5BJE1 867 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 ANKS3Q6ZW76 656 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 RNF135Q8IUD6 432 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 ANKRD13CQ8N6S4 541 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 TEX9Q8N6V9 391 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 VPS37AQ8NEZ2 397 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 NEDD1Q8NHV4 660 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 SHISA4Q96DD7 197 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 CCDC17Q96LX7 622 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 PAPOLBQ9NRJ5 636 aaKnown RBP9.37□□□□□ -0.91
SHQ1-203ENST00000463369 IL17RBQ9NRM6 502 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 ZNF69Q9UC07 566 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 TMEM59LQ9UK28 342 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 MYH7BA7E2Y1 1941 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 PAPPA2Q9BXP8 1791 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 TNKSO95271 1327 aa9.37□□□□□ -0.91
SHQ1-203ENST00000463369 BHMG1C9JSJ3 638 aaPredicted RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 BUB1O43683 1085 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 ATICP31939 592 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 ROR2Q01974 943 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms