RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 OLFML2BQ68BL8 750 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 ZC3H15Q8WU90 426 aaKnown RBP16.79■□□□□ 0.28
SMC4-204ENST00000462787 IP6K2Q9UHH9 426 aa16.79■□□□□ 0.28
SMC4-204ENST00000462787 SLC26A4O43511 780 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 SRGAP2BP0DMP2 458 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 PSMA2P25787 234 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 MAPK7Q13164 816 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 ARHGEF16Q5VV41 709 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 ERICH1Q86X53 443 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 THAP11Q96EK4 314 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 ZBTB1Q9Y2K1 713 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 NMT2O60551 498 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 POLGP54098 1239 aaPredicted RBP16.78■□□□□ 0.28
SMC4-204ENST00000462787 RCN1Q15293 331 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 CRELD2Q6UXH1 353 aaPredicted RBP16.78■□□□□ 0.28
SMC4-204ENST00000462787 ZNF512BQ96KM6 892 aaPredicted RBP16.78■□□□□ 0.28
SMC4-204ENST00000462787 KCNK16Q96T55 309 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 DHX36Q9H2U1 1008 aaKnown RBP16.78■□□□□ 0.28
SMC4-204ENST00000462787 SERPINB13Q9UIV8 391 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 B2RBV5 119 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 CAND2O75155 1236 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 TARSP26639 723 aaKnown RBP16.78■□□□□ 0.28
SMC4-204ENST00000462787 DDR1Q08345 913 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 PRPF31Q8WWY3 499 aaKnown RBP16.78■□□□□ 0.28
SMC4-204ENST00000462787 DCP1AQ9NPI6 582 aaPredicted RBP16.78■□□□□ 0.28
SMC4-204ENST00000462787 CYP26B1Q9NR63 512 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 DDX56Q9NY93 547 aaKnown RBP16.78■□□□□ 0.28
SMC4-204ENST00000462787 DSG1Q02413 1049 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 SLC44A4Q53GD3 710 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 ENOSF1Q7L5Y1 443 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 FBXL16Q8N461 479 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 IPO11Q9UI26 975 aaKnown RBP16.78■□□□□ 0.28
SMC4-204ENST00000462787 ATXN2Q99700 1313 aaKnown RBP16.78■□□□□ 0.28
SMC4-204ENST00000462787 USP31Q70CQ4 1352 aa16.78■□□□□ 0.28
SMC4-204ENST00000462787 CCDC195A0A1B0GUA6 201 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 ZNF233A6NK53 670 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 TRAPPC3O43617 180 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 FNTAP49354 379 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 ARSEP51690 589 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 ZCWPW2Q504Y3 356 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 ACBD5Q5T8D3 534 aaPredicted RBP16.77■□□□□ 0.28
SMC4-204ENST00000462787 TRIM72Q6ZMU5 477 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 CCDC124Q96CT7 223 aaKnown RBP16.77■□□□□ 0.28
SMC4-204ENST00000462787 XDHP47989 1333 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 MAN1A2O60476 641 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 SKAP2O75563 359 aaPredicted RBP16.77■□□□□ 0.28
SMC4-204ENST00000462787 RARGP13631 454 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 DNAAF3Q8N9W5 541 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 C9orf72Q96LT7 481 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 OSBPL8Q9BZF1 889 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 ETAA1Q9NY74 926 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 NUB1Q9Y5A7 615 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 GOLGA8IPA6NC78 632 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 MYMKA6NI61 221 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 GOLGA8JA6NMD2 632 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 CYP2D6P10635 497 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 TNFRSF8P28908 595 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 IFRD2Q12894 506 aaPredicted RBP16.77■□□□□ 0.28
SMC4-204ENST00000462787 HP1BP3Q5SSJ5 553 aaPredicted RBP16.77■□□□□ 0.28
SMC4-204ENST00000462787 POTEAQ6S8J7 498 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 CD302Q8IX05 232 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 C4orf33Q8N1A6 199 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 EIF1ADQ8N9N8 165 aaKnown RBP16.77■□□□□ 0.28
SMC4-204ENST00000462787 TMEM35BQ8NCS4 154 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 THTPAQ9BU02 230 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 ZWILCHQ9H900 591 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 GDF3Q9NR23 364 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 AIPL1Q9NZN9 384 aa16.77■□□□□ 0.28
SMC4-204ENST00000462787 WARS2Q9UGM6 360 aaKnown RBP16.77■□□□□ 0.28
SMC4-204ENST00000462787 WASHC2DQ5SRD0 308 aa16.77■□□□□ 0.27
SMC4-204ENST00000462787 MEI1Q5TIA1 1274 aa16.77■□□□□ 0.27
SMC4-204ENST00000462787 TMEM260Q9NX78 707 aa16.77■□□□□ 0.27
SMC4-204ENST00000462787 ZBTB5O15062 677 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 ELF3P78545 371 aaPredicted RBP16.76■□□□□ 0.27
SMC4-204ENST00000462787 TRIP10Q15642 601 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 ABCB5Q2M3G0 1257 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 ISCA1Q9BUE6 129 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 CAPN9O14815 690 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 KLHL2O95198 593 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 ARL4AP40617 200 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 NPEPPSP55786 919 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 HDAC4P56524 1084 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 TTI2Q6NXR4 508 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 C11orf70Q9BRQ4 267 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 ASAP1Q9ULH1 1129 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 F8VZ95 297 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 COILP38432 576 aaPredicted RBP16.76■□□□□ 0.27
SMC4-204ENST00000462787 THOC5Q13769 683 aaKnown RBP16.76■□□□□ 0.27
SMC4-204ENST00000462787 LZICQ8WZA0 190 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 CCDC134Q9H6E4 229 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 APEX2Q9UBZ4 518 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 KIAA1210Q9ULL0 1709 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 TDP2O95551 362 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 ALDH18A1P54886 795 aaKnown RBP16.76■□□□□ 0.27
SMC4-204ENST00000462787 TBCCQ15814 346 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 ANKRD36BP1Q96IX9 119 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 GCOM2Q9BZD3 368 aaPredicted RBP16.76■□□□□ 0.27
SMC4-204ENST00000462787 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.76■□□□□ 0.274e-34■■■■■ 131.8
SMC4-204ENST00000462787 SPC25Q9HBM1 224 aa16.76■□□□□ 0.27
SMC4-204ENST00000462787 PHTF1Q9UMS5 762 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms