RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 NCOR2Q9Y618 2525 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 PATJQ8NI35 1801 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 NOTCH4Q99466 2003 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 EML1O00423 815 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 ZNF623O75123 536 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 MAFO75444 373 aaPredicted RBP8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 OFD1O75665 1012 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 CXCL14O95715 111 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 GCFC2P16383 781 aaKnown RBP8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 SFPQP23246 707 aaKnown RBP eCLIP8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 NBL1P41271 181 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 ALDH7A1P49419 539 aaKnown RBP8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 XKR3Q5GH77 459 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 NOMO2Q5JPE7 1267 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 PLA2G4FQ68DD2 849 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 TWF2Q6IBS0 349 aaKnown RBP8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 AGMOQ6ZNB7 445 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 ASCL5Q7RTU5 278 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 ZNF410Q86VK4 478 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 ZNF280BQ86YH2 543 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 TDRD5Q8NAT2 981 aaKnown RBP8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 FBXO18Q8NFZ0 1043 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 RSPH1Q8WYR4 309 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 HAS1Q92839 578 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 C8orf76Q96K31 380 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 GCOM2Q9BZD3 368 aaPredicted RBP8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 MINDY3Q9H8M7 445 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 IFT122Q9HBG6 1241 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 AGPAT5Q9NUQ2 364 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 WRAP73Q9P2S5 460 aaPredicted RBP8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 USTQ9Y2C2 406 aa8.86□□□□□ -0.99
CDC42BPA-210ENST00000462553 MYH11P35749 1972 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 PRR23AA6NEV1 266 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 CCNT1O60563 726 aaKnown RBP8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 LILRB3O75022 631 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 DDHD2O94830 711 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 EFEMP2O95967 443 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 CA8P35219 290 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 RAB27AP51159 221 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 CLCN4P51793 760 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 SPIRE1Q08AE8 756 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 PPP2R5CQ13362 524 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 UBXN11Q5T124 520 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 GLB1LQ6UWU2 654 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 TMC5Q6UXY8 1006 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 GPR149Q86SP6 731 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 RHPN2Q8IUC4 686 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 NLRP4Q96MN2 994 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 SFXN1Q9H9B4 322 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 BRMS1Q9HCU9 246 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 MARCH5Q9NX47 278 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 SUCLA2Q9P2R7 463 aaPredicted RBP8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 LIMD1Q9UGP4 676 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 DBR1Q9UK59 544 aaKnown RBP8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 INPP5FQ9Y2H2 1132 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 SPTBN2O15020 2390 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 COL4A3Q01955 1670 aa8.85□□□□□ -0.99
CDC42BPA-210ENST00000462553 TBX3O15119 743 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 N4BP1O75113 896 aaKnown RBP8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 CNPP09543 421 aaKnown RBP8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 NPR3P17342 541 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 HOXA11P31270 313 aaPredicted RBP8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 MCM2P49736 904 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 NPEPPSP55786 919 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 CDC42EP1Q00587 391 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 CUL4AQ13619 759 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 TRIM29Q14134 588 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 GIT2Q14161 759 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 ATAT1Q5SQI0 421 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 CATSPER4Q7RTX7 472 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 MRPL10Q7Z7H8 261 aaKnown RBP8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 CABP7Q86V35 215 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 RNF168Q8IYW5 571 aaPredicted RBP8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 FAM20AQ96MK3 541 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 KLHL5Q96PQ7 755 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 GBP3Q9H0R5 595 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 IRF2BPLQ9H1B7 796 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 TMEM60Q9H2L4 133 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 FOXP1Q9H334 677 aaPredicted RBP8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 DHX33Q9H6R0 707 aaKnown RBP8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 CYP26B1Q9NR63 512 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 DUSP12Q9UNI6 340 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 PCDHB2Q9Y5E7 798 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 COL4A3BPQ9Y5P4 624 aa8.84□□□□□ -0.99
CDC42BPA-210ENST00000462553 CNTNAP2Q9UHC6 1331 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 EPG5Q9HCE0 2579 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 CARNS1A5YM72 827 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 DDX11L8A8MPP1 907 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 F8W810 466 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 INPPL1O15357 1258 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 SSBP05455 408 aaKnown RBP eCLIP8.83□□□□□ -1
CDC42BPA-210ENST00000462553 SKIP12755 728 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 U2AF2P26368 475 aaKnown RBP eCLIP8.83□□□□□ -1
CDC42BPA-210ENST00000462553 GJB2P29033 226 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 DNM2P50570 870 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 CLCN5P51795 746 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 PSMC5P62195 406 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 RNASELQ05823 741 aaKnown RBP8.83□□□□□ -1
CDC42BPA-210ENST00000462553 CCDC149Q6ZUS6 474 aa8.83□□□□□ -1
CDC42BPA-210ENST00000462553 PPFIBP1Q86W92 1011 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms