RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 RSPO2Q6UXX9 243 aaPredicted RBP13.07□□□□□ -0.32
PCCB-203ENST00000462542 MIER3Q7Z3K6 550 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 SRGAP1Q7Z6B7 1085 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 COLGALT2Q8IYK4 626 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 RNF168Q8IYW5 571 aaPredicted RBP13.07□□□□□ -0.32
PCCB-203ENST00000462542 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 COLEC11Q9BWP8 271 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 UNC45AQ9H3U1 944 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 IFT122Q9HBG6 1241 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 CHST7Q9NS84 486 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 SPATA6Q9NWH7 488 aaPredicted RBP13.07□□□□□ -0.32
PCCB-203ENST00000462542 FNIP2Q9P278 1114 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 NUMBLQ9Y6R0 609 aa13.07□□□□□ -0.32
PCCB-203ENST00000462542 MTCL1Q9Y4B5 1905 aaKnown RBP13.07□□□□□ -0.32
PCCB-203ENST00000462542 TPRP12270 2363 aaKnown RBP13.07□□□□□ -0.32
PCCB-203ENST00000462542 KLF18A0A0U1RQI7 1052 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 POTEMA6NI47 508 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 PRPF3O43395 683 aaKnown RBP13.06□□□□□ -0.32
PCCB-203ENST00000462542 CHMP2AO43633 222 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 PSMD10O75832 226 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 SPATA31D3P0C874 917 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 ITGA4P13612 1032 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 FSHRP23945 695 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 HOXA11P31270 313 aaPredicted RBP13.06□□□□□ -0.32
PCCB-203ENST00000462542 ADD1P35611 737 aaKnown RBP13.06□□□□□ -0.32
PCCB-203ENST00000462542 GPC5P78333 572 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 LMNB2Q03252 620 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 PCBP1Q15365 356 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCCB-203ENST00000462542 USP41Q3LFD5 358 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 SLC44A4Q53GD3 710 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 LILRA6Q6PI73 481 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 POTEGQ6S5H5 508 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 SPATA31D4Q6ZUB0 917 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 PALB2Q86YC2 1186 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 KSR1Q8IVT5 923 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 NLRP4Q96MN2 994 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 NELL2Q99435 816 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 DDX23Q9BUQ8 820 aaKnown RBP13.06□□□□□ -0.32
PCCB-203ENST00000462542 FOXQ1Q9C009 403 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 PPME1Q9Y570 386 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 COL4A3BPQ9Y5P4 624 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 DOCK8Q8NF50 2099 aa13.06□□□□□ -0.32
PCCB-203ENST00000462542 ADAMTS3O15072 1205 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 NCAM2O15394 837 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 ASAP2O43150 1006 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 TGM5O43548 720 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 TBC1D4O60343 1298 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 DKC1O60832 514 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCCB-203ENST00000462542 PFKPQ01813 784 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 AKAP17AQ02040 695 aaKnown RBP13.05□□□□□ -0.32
PCCB-203ENST00000462542 CSTF1Q05048 431 aaKnown RBP13.05□□□□□ -0.32
PCCB-203ENST00000462542 NCBP1Q09161 790 aaKnown RBP13.05□□□□□ -0.32
PCCB-203ENST00000462542 TSGA10IPQ3SY00 556 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 Q4G0T1 1027 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 MTSS1LQ765P7 747 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 GET4Q7L5D6 327 aaPredicted RBP13.05□□□□□ -0.32
PCCB-203ENST00000462542 ZBTB44Q8NCP5 570 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 SLC7A3Q8WY07 619 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 RTKNQ9BST9 563 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 C22orf23Q9BZE7 217 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 MARCH5Q9NX47 278 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 ZSCAN32Q9NX65 697 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 CDV3Q9UKY7 258 aaKnown RBP13.05□□□□□ -0.32
PCCB-203ENST00000462542 CDH7Q9ULB5 785 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 PRG3Q9Y2Y8 225 aaPredicted RBP13.05□□□□□ -0.32
PCCB-203ENST00000462542 ACACBO00763 2458 aa13.05□□□□□ -0.32
PCCB-203ENST00000462542 ARL5CA6NH57 179 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 FAM170BA6NMN3 283 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 ZMYND10O75800 440 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 HMGB1P09429 215 aaKnown RBP13.04□□□□□ -0.32
PCCB-203ENST00000462542 SRGAP2CP0DJJ0 459 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 MYBP10242 640 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 AXLP30530 894 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 PSMC5P62195 406 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 DSC1Q08554 894 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 SNW1Q13573 536 aaKnown RBP13.04□□□□□ -0.32
PCCB-203ENST00000462542 MLF2Q15773 248 aaPredicted RBP13.04□□□□□ -0.32
PCCB-203ENST00000462542 ZBTB41Q5SVQ8 909 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 UBXN11Q5T124 520 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 B3GNT9Q6UX72 402 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 ANO5Q75V66 913 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 CCDC148Q8NFR7 591 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 PRPF31Q8WWY3 499 aaKnown RBP13.04□□□□□ -0.32
PCCB-203ENST00000462542 SH2D3AQ9BRG2 576 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 FAM126AQ9BYI3 521 aaPredicted RBP13.04□□□□□ -0.32
PCCB-203ENST00000462542 EPC1Q9H2F5 836 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 ANO2Q9NQ90 1003 aa13.04□□□□□ -0.32
PCCB-203ENST00000462542 CYP3A7-CYP3A51PA0A087WV96 503 aa13.03□□□□□ -0.32
PCCB-203ENST00000462542 TMEM150BA6NC51 233 aa13.03□□□□□ -0.32
PCCB-203ENST00000462542 EDIL3O43854 480 aa13.03□□□□□ -0.32
PCCB-203ENST00000462542 LRRN2O75325 713 aa13.03□□□□□ -0.32
PCCB-203ENST00000462542 HNRNPA1P09651 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCCB-203ENST00000462542 CYP3A7P24462 503 aa13.03□□□□□ -0.32
PCCB-203ENST00000462542 KRT32Q14532 448 aa13.03□□□□□ -0.32
PCCB-203ENST00000462542 PARM1Q6UWI2 310 aa13.03□□□□□ -0.32
PCCB-203ENST00000462542 SMG8Q8ND04 991 aaKnown RBP13.03□□□□□ -0.32
PCCB-203ENST00000462542 PSPC1Q8WXF1 523 aaKnown RBP13.03□□□□□ -0.32
PCCB-203ENST00000462542 NELL1Q92832 810 aa13.03□□□□□ -0.32
PCCB-203ENST00000462542 FGF14Q92915 247 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms