RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 COLGALT2Q8IYK4 626 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
CBX3-205ENST00000462165 CNNM3Q8NE01 707 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 ETNPPLQ8TBG4 499 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 MBOAT7Q96N66 472 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 SLC26A6Q9BXS9 759 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 AGXT2Q9BYV1 514 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 TBC1D17Q9HA65 648 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 UBN1Q9NPG3 1134 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 CA14Q9ULX7 337 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 PPME1Q9Y570 386 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 R4GN57 208 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 MYH15Q9Y2K3 1946 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 TDP2O95551 362 aa12.14□□□□□ -0.47
CBX3-205ENST00000462165 GLUD2P49448 558 aa12.14□□□□□ -0.47
CBX3-205ENST00000462165 NLRP5P59047 1200 aa12.14□□□□□ -0.47
CBX3-205ENST00000462165 DSG1Q02413 1049 aa12.14□□□□□ -0.47
CBX3-205ENST00000462165 SMG8Q8ND04 991 aaKnown RBP12.14□□□□□ -0.47
CBX3-205ENST00000462165 GPR152Q8TDT2 470 aa12.14□□□□□ -0.47
CBX3-205ENST00000462165 SLC7A3Q8WY07 619 aa12.14□□□□□ -0.47
CBX3-205ENST00000462165 RIN2Q8WYP3 895 aaPredicted RBP12.14□□□□□ -0.47
CBX3-205ENST00000462165 SMG7Q92540 1137 aaKnown RBP12.14□□□□□ -0.47
CBX3-205ENST00000462165 KCNB2Q92953 911 aa12.14□□□□□ -0.47
CBX3-205ENST00000462165 ZNF707Q96C28 371 aaPredicted RBP12.14□□□□□ -0.47
CBX3-205ENST00000462165 PLEKHA4Q9H4M7 779 aa12.14□□□□□ -0.47
CBX3-205ENST00000462165 MINDY3Q9H8M7 445 aa12.14□□□□□ -0.47
CBX3-205ENST00000462165 DLGAP2Q9P1A6 1054 aa12.14□□□□□ -0.47
CBX3-205ENST00000462165 PCDHA4Q9UN74 947 aa12.14□□□□□ -0.47
CBX3-205ENST00000462165 PRG3Q9Y2Y8 225 aaPredicted RBP12.14□□□□□ -0.47
CBX3-205ENST00000462165 DOCK6Q96HP0 2047 aa12.14□□□□□ -0.47
CBX3-205ENST00000462165 CACNA1IQ9P0X4 2223 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 OTOGLQ3ZCN5 2332 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 ANHXE9PGG2 379 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 M0R2N6 131 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 DKC1O60832 514 aaKnown RBP eCLIP12.13□□□□□ -0.47
CBX3-205ENST00000462165 DCNP07585 359 aaKnown RBP12.13□□□□□ -0.47
CBX3-205ENST00000462165 LAMP2P13473 410 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 OR1G1P47890 313 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 QARSP47897 775 aaKnown RBP12.13□□□□□ -0.47
CBX3-205ENST00000462165 NPEPPSP55786 919 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 DSC1Q08554 894 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 ZC3H14Q6PJT7 736 aaKnown RBP12.13□□□□□ -0.47
CBX3-205ENST00000462165 BLOC1S2Q6QNY1 142 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 DGLUCYQ7Z3D6 616 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 C1orf210Q8IVY1 113 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 GPR65Q8IYL9 337 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 KIAA2013Q8IYS2 634 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 PRPF31Q8WWY3 499 aaKnown RBP12.13□□□□□ -0.47
CBX3-205ENST00000462165 PSPC1Q8WXF1 523 aaKnown RBP12.13□□□□□ -0.47
CBX3-205ENST00000462165 NT5C3AQ9H0P0 336 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 DHX33Q9H6R0 707 aaKnown RBP12.13□□□□□ -0.47
CBX3-205ENST00000462165 ARHGEF3Q9NR81 526 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 SLC2A4RGQ9NR83 387 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 CHST7Q9NS84 486 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 ZDHHC7Q9NXF8 308 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.13□□□□□ -0.47
CBX3-205ENST00000462165 SIT1Q9Y3P8 196 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 PATJQ8NI35 1801 aa12.13□□□□□ -0.47
CBX3-205ENST00000462165 MED19A0JLT2 244 aaPredicted RBP12.12□□□□□ -0.47
CBX3-205ENST00000462165 ARL5CA6NH57 179 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 EML1O00423 815 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 ASAP2O43150 1006 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 GAS2O43903 313 aaKnown RBP12.12□□□□□ -0.47
CBX3-205ENST00000462165 SP9P0CG40 484 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 SRGAP2CP0DJJ0 459 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 ITGA4P13612 1032 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 AXLP30530 894 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 RFC5P40937 340 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 EVCP57679 992 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 LAMTOR4Q0VGL1 99 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 PPP2R5CQ13362 524 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 HTR4Q13639 388 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 PUM1Q14671 1186 aaKnown RBP eCLIP12.12□□□□□ -0.476e-15■□□□□ 9.6
CBX3-205ENST00000462165 PCBP1Q15365 356 aaKnown RBP eCLIP12.12□□□□□ -0.47
CBX3-205ENST00000462165 SPECC1Q5M775 1068 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 RNF149Q8NC42 400 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 TMEM143Q96AN5 459 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 CEP170P1Q96L14 293 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 JAKMIP1Q96N16 626 aaKnown RBP12.12□□□□□ -0.47
CBX3-205ENST00000462165 PRKD2Q9BZL6 878 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.12□□□□□ -0.47
CBX3-205ENST00000462165 MIOSQ9NXC5 875 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 FNIP2Q9P278 1114 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 IPPQ9Y573 584 aa12.12□□□□□ -0.47
CBX3-205ENST00000462165 F8W810 466 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 TGM5O43548 720 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 NR1I2O75469 434 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 P4HBP07237 508 aaKnown RBP12.11□□□□□ -0.47
CBX3-205ENST00000462165 SPATA31D3P0C874 917 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 MYBP10242 640 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 RPS6KB1P23443 525 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 PDIA3P30101 505 aaKnown RBP12.11□□□□□ -0.47
CBX3-205ENST00000462165 MLH1P40692 756 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 SCNN1GP51170 649 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 IRX6P78412 446 aaPredicted RBP12.11□□□□□ -0.47
CBX3-205ENST00000462165 LILRA6Q6PI73 481 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 DCLRE1AQ6PJP8 1040 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 POTEGQ6S5H5 508 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 SPATA31D4Q6ZUB0 917 aa12.11□□□□□ -0.47
CBX3-205ENST00000462165 GET4Q7L5D6 327 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms