RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 MUC3AQ02505 3323 aa9.82□□□□□ -0.84
LDB1-203ENST00000461873 TTC28Q96AY4 2481 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 FAM86C2PA6NEL3 165 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 HIDE1A8MVS5 230 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 PRR33A8MZF0 331 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 FSCN2O14926 492 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 TSPAN1O60635 241 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 SSBP05455 408 aaKnown RBP eCLIP9.81□□□□□ -0.84
LDB1-203ENST00000461873 GALTP07902 379 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 ARL2P36404 184 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 MTHFRP42898 656 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 ITIH3Q06033 890 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 PRPF4BQ13523 1007 aaKnown RBP9.81□□□□□ -0.84
LDB1-203ENST00000461873 CAPSQ13938 189 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 PDIA5Q14554 519 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 CBX2Q14781 532 aaPredicted RBP9.81□□□□□ -0.84
LDB1-203ENST00000461873 RILPL1Q5EBL4 403 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 ATAT1Q5SQI0 421 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 ANKRD54Q6NXT1 300 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 PADI6Q6TGC4 694 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 RASSF8Q8NHQ8 419 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 SNX29Q8TEQ0 813 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 MFSD14AQ96MC6 490 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 LRFN3Q9BTN0 628 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 APOL5Q9BWW9 433 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 NFKBIZQ9BYH8 718 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 TMEM60Q9H2L4 133 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 RNF19AQ9NV58 838 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 CLEC1BQ9P126 229 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 GIT1Q9Y2X7 761 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 IPPQ9Y573 584 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 ARID2Q68CP9 1835 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 PHLPP2Q6ZVD8 1323 aa9.81□□□□□ -0.84
LDB1-203ENST00000461873 C2orf71A6NGG8 1288 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 CCDC169A6NNP5 214 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 C2CD2LO14523 706 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 NRP1O14786 923 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 N4BP3O15049 544 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 TADA2AO75478 443 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 NPTXRO95502 500 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 CTSAP10619 480 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 ATF7P17544 494 aaPredicted RBP9.8□□□□□ -0.84
LDB1-203ENST00000461873 GLRA2P23416 452 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 MLH1P40692 756 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 EFNA5P52803 228 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 PTGDRQ13258 359 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 C8orf34Q49A92 452 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 POTEGQ6S5H5 508 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 MRPL10Q7Z7H8 261 aaKnown RBP9.8□□□□□ -0.84
LDB1-203ENST00000461873 RNF135Q8IUD6 432 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 SUGP1Q8IWZ8 645 aaKnown RBP9.8□□□□□ -0.84
LDB1-203ENST00000461873 ASAP3Q8TDY4 903 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 KIFAP3Q92845 792 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 MSLNLQ96KJ4 702 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 GAD1Q99259 594 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 MINDY3Q9H8M7 445 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 KIAA1024Q9UPX6 916 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 PRG3Q9Y2Y8 225 aaPredicted RBP9.8□□□□□ -0.84
LDB1-203ENST00000461873 HCFC2Q9Y5Z7 792 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 ATG2AQ2TAZ0 1938 aa9.8□□□□□ -0.84
LDB1-203ENST00000461873 A0A087WWV3 80 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 ARL5CA6NH57 179 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 C19orf67A6NJJ6 358 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 CLASP2O75122 1294 aaKnown RBP9.79□□□□□ -0.84
LDB1-203ENST00000461873 MED24O75448 989 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 GLP2RO95838 553 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 PRKCBP05771 671 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 ADH1AP07327 375 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 ARF4P18085 180 aaPredicted RBP9.79□□□□□ -0.84
LDB1-203ENST00000461873 CYP11B2P19099 503 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 HOXA11P31270 313 aaPredicted RBP9.79□□□□□ -0.84
LDB1-203ENST00000461873 NAMPTP43490 491 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 SLC11A1P49279 550 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 FXR2P51116 673 aaKnown RBP eCLIP9.79□□□□□ -0.84
LDB1-203ENST00000461873 YARSP54577 528 aaKnown RBP9.79□□□□□ -0.84
LDB1-203ENST00000461873 CREMQ03060 361 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 MBTD1Q05BQ5 628 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 DMP1Q13316 513 aaPredicted RBP9.79□□□□□ -0.84
LDB1-203ENST00000461873 TMEM184AQ6ZMB5 413 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 AGMOQ6ZNB7 445 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 ZNF280BQ86YH2 543 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 IFNLR1Q8IU57 520 aaPredicted RBP9.79□□□□□ -0.84
LDB1-203ENST00000461873 ACSF2Q96CM8 615 aaPredicted RBP9.79□□□□□ -0.84
LDB1-203ENST00000461873 DRC1Q96MC2 740 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 TCHPQ9BT92 498 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 EIF2AQ9BY44 585 aaKnown RBP9.79□□□□□ -0.84
LDB1-203ENST00000461873 BACH2Q9BYV9 841 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 NT5C3AQ9H0P0 336 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 ZBP1Q9H171 429 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 BHMT2Q9H2M3 363 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 CD320Q9NPF0 282 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 XPNPEP1Q9NQW7 623 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 DDX19AQ9NUU7 478 aaKnown RBP9.79□□□□□ -0.84
LDB1-203ENST00000461873 DNAJB4Q9UDY4 337 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 MUTYHQ9UIF7 546 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
LDB1-203ENST00000461873 TDRD15B5MCY1 1934 aaKnown RBP9.79□□□□□ -0.84
LDB1-203ENST00000461873 A0A1B0GUA9 196 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 MEIS3P2A8K0S8 358 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 K7ERI5 159 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms