RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 TOM1L1O75674 476 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 ACTN1P12814 892 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 UCHL3P15374 230 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 SLC9A1P19634 815 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 ACOT2P49753 483 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 DNA2P51530 1060 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 YWHAEP62258 255 aaKnown RBP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 ARHGAP1Q07960 439 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 MOGSQ13724 837 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 MTF1Q14872 753 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 GRIK4Q16099 956 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 ODF2Q5BJF6 829 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 MIIPQ5JXC2 388 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 PRAMEF19Q5SWL8 479 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 ZFYVE27Q5T4F4 411 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 ATF7IP2Q5U623 682 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 E4F1Q66K89 784 aaPredicted RBP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 IQCEQ6IPM2 695 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 ZPBP2Q6X784 338 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 REM2Q8IYK8 340 aaPredicted RBP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 FBXL13Q8NEE6 735 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 U2AF1L4Q8WU68 220 aaKnown RBP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 CTNNBL1Q8WYA6 563 aaPredicted RBP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 UBXN4Q92575 508 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 SECISBP2LQ93073 1101 aaKnown RBP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 ANKRD36BP1Q96IX9 119 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 NOX5Q96PH1 765 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 PTPN18Q99952 460 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 DAAM1Q9Y4D1 1078 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 CEP83Q9Y592 693 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 ADGRG1Q9Y653 693 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 PAPPA2Q9BXP8 1791 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 GTPBP10A4D1E9 387 aaKnown RBP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 TISP43B9A030 160 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 KPNA6O60684 536 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 TRPA1O75762 1119 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 ATG7O95352 703 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 H2AFZP0C0S5 128 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 P4HA1P13674 534 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 PBX1P40424 430 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 MARSP56192 900 aaKnown RBP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 NLRP11P59045 1033 aaKnown RBP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 CYP27A1Q02318 531 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 SP3Q02447 781 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 CAPSQ13938 189 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 DRAP1Q14919 205 aaPredicted RBP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 NFIL3Q16649 462 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 KIAA0753Q2KHM9 967 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 CCDC62Q6P9F0 684 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 H2AFVQ71UI9 128 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 APTXQ7Z2E3 356 aaKnown RBP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 C12orf56Q8IXR9 622 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 TMC2Q8TDI7 906 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 LMBR1Q8WVP7 490 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 BSNDQ8WZ55 320 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 DNAJC7Q99615 494 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 CHP1Q99653 195 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 NAPGQ99747 312 aaPredicted RBP4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 TMEM8AQ9HCN3 771 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 PLCB1Q9NQ66 1216 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 APEX2Q9UBZ4 518 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 FHOD1Q9Y613 1164 aa4.46□□□□□ -1.7
ATP13A3-206ENST00000461660 USP27XA6NNY8 438 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 TMCO5BA8MYB1 307 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 OGTO15294 1046 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 LGR5O75473 907 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 SLU7O95391 586 aaKnown RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 YY1P25490 414 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 PAFAH1B1P43034 410 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 FLT3LGP49771 235 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 PDE6CP51160 858 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 AP3M2P53677 418 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 BPIFB4P59827 614 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 FSCN1Q16658 493 aaKnown RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 KYAT1Q16773 422 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 KLHDC7AQ5VTJ3 777 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 RAD9BQ6WBX8 426 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 NPLOC4Q8TAT6 608 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 APOL6Q9BWW8 343 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 IKZF4Q9H2S9 585 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 TMEM134Q9H6X4 195 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 SETD4Q9NVD3 440 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 ARGLU1Q9NWB6 273 aaPredicted RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 ARHGAP28Q9P2N2 729 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 ADAMTS1Q9UHI8 967 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 PLAGL2Q9UPG8 496 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 SIK3Q9Y2K2 1263 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 POLR2AP24928 1970 aaKnown RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 SSU72P8A0A1W2PR75 194 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 EIF3CLB5ME19 914 aaKnown RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 ANKRD63C9JTQ0 380 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 XPOTO43592 962 aaKnown RBP4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 MMP3P08254 477 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 HOXC6P09630 235 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 CD19P15391 556 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 SMPD1P17405 629 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 PON1P27169 355 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 ARL2P36404 184 aa4.45□□□□□ -1.7
ATP13A3-206ENST00000461660 PSEN2P49810 448 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms