RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 CTSAP10619 480 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 HOXB8P17481 243 aaPredicted RBP15.45■□□□□ 0.06
USP4-206ENST00000461553 CCT6AP40227 531 aaKnown RBP15.45■□□□□ 0.06
USP4-206ENST00000461553 MLH1P40692 756 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 KCNC3Q14003 757 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 AMHR2Q16671 573 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 TMEM132AQ24JP5 1023 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 TPRNQ4KMQ1 711 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 CDCA2Q69YH5 1023 aaPredicted RBP15.45■□□□□ 0.06
USP4-206ENST00000461553 SLC27A1Q6PCB7 646 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 PADI6Q6TGC4 694 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 ZNF280BQ86YH2 543 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 BCL7CQ8WUZ0 217 aaPredicted RBP15.45■□□□□ 0.06
USP4-206ENST00000461553 PRIMPOLQ96LW4 560 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 PHF7Q9BWX1 381 aaPredicted RBP15.45■□□□□ 0.06
USP4-206ENST00000461553 C2orf40Q9H1Z8 148 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 NXF3Q9H4D5 531 aaKnown RBP15.45■□□□□ 0.06
USP4-206ENST00000461553 PRMT7Q9NVM4 692 aaPredicted RBP15.45■□□□□ 0.06
USP4-206ENST00000461553 LRWD1Q9UFC0 647 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 STK24Q9Y6E0 443 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 ZMYM2Q9UBW7 1377 aa15.45■□□□□ 0.06
USP4-206ENST00000461553 MTCL1Q9Y4B5 1905 aaKnown RBP15.45■□□□□ 0.06
USP4-206ENST00000461553 TECTAO75443 2155 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 ARL5CA6NH57 179 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 PRR33A8MZF0 331 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 LAD1O00515 517 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 B4GALT3O60512 393 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 CLASP2O75122 1294 aaKnown RBP15.44■□□□□ 0.06
USP4-206ENST00000461553 DDHD2O94830 711 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 NPTXRO95502 500 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 CXCL14O95715 111 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 CBX2Q14781 532 aaPredicted RBP15.44■□□□□ 0.06
USP4-206ENST00000461553 PPP2R5AQ15172 486 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 MCTP1Q6DN14 999 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 PPP4R3CPQ6ZMV5 832 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 SNX29Q8TEQ0 813 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 AUTS2Q8WXX7 1259 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 SUSD6Q92537 303 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 GAD1Q99259 594 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 APOL5Q9BWW9 433 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 RAPGEFL1Q9UHV5 662 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 MUTYHQ9UIF7 546 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 FAN1Q9Y2M0 1017 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 HES2Q9Y543 173 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 PCDHB6Q9Y5E3 794 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 IRAK3Q9Y616 596 aa15.44■□□□□ 0.06
USP4-206ENST00000461553 ZNF318Q5VUA4 2279 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 H3BQV1 296 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 INPPL1O15357 1258 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 CYP11B2P19099 503 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 NAMPTP43490 491 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 MCM2P49736 904 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 SCNN1GP51170 649 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 AFF1P51825 1210 aaKnown RBP15.43■□□□□ 0.06
USP4-206ENST00000461553 PTGDRQ13258 359 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 PTPN14Q15678 1187 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 CES5AQ6NT32 575 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 SYCE2Q6PIF2 218 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 RNF135Q8IUD6 432 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 DEPTORQ8TB45 409 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 TMX3Q96JJ7 454 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 RPS6KC1Q96S38 1066 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 DZANK1Q9NVP4 752 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 GIT1Q9Y2X7 761 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 PRG3Q9Y2Y8 225 aaPredicted RBP15.43■□□□□ 0.06
USP4-206ENST00000461553 MUC6Q6W4X9 2439 aa15.43■□□□□ 0.06
USP4-206ENST00000461553 A0A1B0GUA9 196 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 LOC730098B7Z3J9 87 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 NRP1O14786 923 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 N4BP3O15049 544 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 NR1I2O75469 434 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 ALDH2P05091 517 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 SSBP05455 408 aaKnown RBP eCLIP15.42■□□□□ 0.06
USP4-206ENST00000461553 PRKCBP05771 671 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 URODP06132 367 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 OR1G1P47890 313 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 TOB1P50616 345 aaPredicted RBP15.42■□□□□ 0.06
USP4-206ENST00000461553 MAPK6Q16659 721 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 RILPL1Q5EBL4 403 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 HERC4Q5GLZ8 1057 aaPredicted RBP15.42■□□□□ 0.06
USP4-206ENST00000461553 KRT79Q5XKE5 535 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 PPFIBP1Q86W92 1011 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 CDR2LQ86X02 465 aaPredicted RBP15.42■□□□□ 0.06
USP4-206ENST00000461553 COLGALT2Q8IYK4 626 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 C4orf32Q8N8J7 132 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 IGSF22Q8N9C0 903 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 BSNDQ8WZ55 320 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 RPGRIP1Q96KN7 1286 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 IFT74Q96LB3 600 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 ZFP42Q96MM3 310 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 NECTIN4Q96NY8 510 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 ADPGKQ9BRR6 497 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 HERC2P3Q9BVR0 1158 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 VN1R3Q9BXE9 311 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 EMILIN2Q9BXX0 1053 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 BHMT2Q9H2M3 363 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
USP4-206ENST00000461553 DDX19AQ9NUU7 478 aaKnown RBP15.42■□□□□ 0.06
USP4-206ENST00000461553 MARCH5Q9NX47 278 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms