RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 APOBRQ0VD83 1088 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 BRDTQ58F21 947 aaPredicted RBP7.91□□□□□ -1.14
NUP50-212ENST00000461194 KCNV1Q6PIU1 500 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 USP17L6PQ6QN14 398 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 Q6ZS46 218 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 TEX2Q8IWB9 1127 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 SLC43A3Q8NBI5 491 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 IL31RAQ8NI17 732 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 SMARCC2Q8TAQ2 1214 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 COPS5Q92905 334 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 SEZ6LQ9BYH1 1024 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 MIR1-1HGQ9H1L0 117 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 PSTPIP2Q9H939 334 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 PRDM5Q9NQX1 630 aaPredicted RBP7.91□□□□□ -1.14
NUP50-212ENST00000461194 PDLIM7Q9NR12 457 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 DDX41Q9UJV9 622 aaKnown RBP7.91□□□□□ -1.14
NUP50-212ENST00000461194 CYP46A1Q9Y6A2 500 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 MRVI1Q9Y6F6 885 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 MROH7Q68CQ1 1323 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 NID2Q14112 1375 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 LCTP09848 1927 aa7.91□□□□□ -1.14
NUP50-212ENST00000461194 CEP290O15078 2479 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 MCM3APO60318 1980 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 GRIN2DO15399 1336 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 TRIM43BA6NCK2 446 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 DCDC2CA8MYV0 355 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 hCG_1984214I3L0E3 225 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 KIAA0355O15063 1070 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 KPNA6O60684 536 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 STAM2O75886 525 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 TIAF1O95411 115 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 GH1P01241 217 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 TGFB3P10600 412 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 ADH5P11766 374 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 PREPP48147 710 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 USP11P51784 963 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 ANAPC15P60006 121 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 MRPS9P82933 396 aaKnown RBP7.9□□□□□ -1.14
NUP50-212ENST00000461194 PURAQ00577 322 aaKnown RBP7.9□□□□□ -1.14
NUP50-212ENST00000461194 ARHGAP1Q07960 439 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 CAMK2GQ13555 558 aaPredicted RBP7.9□□□□□ -1.14
NUP50-212ENST00000461194 ITGA7Q13683 1181 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 DOC2BQ14184 412 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 LY6KQ17RY6 165 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 WWC2Q6AWC2 1192 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 XRRA1Q6P2D8 792 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 HEATR3Q7Z4Q2 680 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 FAM126BQ8IXS8 530 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 ZNF713Q8N859 430 aaPredicted RBP7.9□□□□□ -1.14
NUP50-212ENST00000461194 TRIM43Q96BQ3 446 aaPredicted RBP7.9□□□□□ -1.14
NUP50-212ENST00000461194 LBHD1Q9BQE6 289 aaPredicted RBP7.9□□□□□ -1.14
NUP50-212ENST00000461194 MTG1Q9BT17 334 aaPredicted RBP7.9□□□□□ -1.14
NUP50-212ENST00000461194 BARHL2Q9NY43 387 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 CACNA2D2Q9NY47 1150 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 NAP1L2Q9ULW6 460 aaPredicted RBP7.9□□□□□ -1.14
NUP50-212ENST00000461194 AP4E1Q9UPM8 1137 aa7.9□□□□□ -1.14
NUP50-212ENST00000461194 BAZ2BQ9UIF8 2168 aaKnown RBP7.9□□□□□ -1.15
NUP50-212ENST00000461194 ALPK3Q96L96 1907 aa7.9□□□□□ -1.15
NUP50-212ENST00000461194 LRRC37A2A6NM11 1700 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 DNAH12Q6ZR08 3092 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 MSTNO14793 375 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 TLR3O15455 904 aaKnown RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 PRPF3O43395 683 aaKnown RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 GAS2O43903 313 aaKnown RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 CD4P01730 458 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 MMP3P08254 477 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 MYL3P08590 195 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 ITGB8P26012 769 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 PDIA3P30101 505 aaKnown RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 ICAM3P32942 547 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 FXR1P51114 621 aaKnown RBP eCLIP7.89□□□□□ -1.15
NUP50-212ENST00000461194 NAPAP54920 295 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 PSMC6P62333 389 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 ID3Q02535 119 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 LMNB2Q03252 620 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 TOB2Q14106 344 aaPredicted RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 NTRK3Q16288 839 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 PFKFB3Q16875 520 aaPredicted RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 GNPTABQ3T906 1256 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 ZNF394Q53GI3 561 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 SCARA3Q6AZY7 606 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 NT5DC4Q86YG4 428 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 DHX37Q8IY37 1157 aaKnown RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 TDHQ8IZJ6 230 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 C2CD4AQ8NCU7 369 aaPredicted RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 AFG1LQ8WV93 481 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 BADQ92934 168 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 TP53INP1Q96A56 240 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 IL17RAQ96F46 866 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 FAM46AQ96IP4 442 aaKnown RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 INPP4AQ96PE3 977 aaPredicted RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 SPOCK3Q9BQ16 436 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 UPF3BQ9BZI7 483 aaKnown RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 GLT8D2Q9H1C3 349 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 PDRG1Q9NUG6 133 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 TBX21Q9UL17 535 aa7.89□□□□□ -1.15
NUP50-212ENST00000461194 RANBP2P49792 3224 aaKnown RBP7.89□□□□□ -1.15
NUP50-212ENST00000461194 SMCO2A6NFE2 343 aa7.88□□□□□ -1.15
NUP50-212ENST00000461194 STXBP3O00186 592 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms