RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 MYL7Q01449 175 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 CYP27A1Q02318 531 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 PPP3CAQ08209 521 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 KIAA1328Q86T90 577 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 TRIM58Q8NG06 486 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 ASAP3Q8TDY4 903 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 ATP8B4Q8TF62 1192 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 INTS2Q9H0H0 1204 aaKnown RBP11.82□□□□□ -0.52
IFT88-204ENST00000461115 ZCCHC17Q9NP64 241 aaKnown RBP11.82□□□□□ -0.52
IFT88-204ENST00000461115 VTA1Q9NP79 307 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 LUC7LQ9NQ29 371 aaKnown RBP11.82□□□□□ -0.52
IFT88-204ENST00000461115 AJAP1Q9UKB5 411 aaPredicted RBP11.82□□□□□ -0.52
IFT88-204ENST00000461115 INTUQ9ULD6 942 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 GUCA1BQ9UMX6 200 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 EVPLQ92817 2033 aa11.82□□□□□ -0.52
IFT88-204ENST00000461115 CCL15-CCL14A0A0B4J2E2 113 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 F8VZ95 297 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 CYP2C8P10632 490 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 SOX5P35711 763 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 STAT1P42224 750 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 POLGP54098 1239 aaPredicted RBP11.81□□□□□ -0.52
IFT88-204ENST00000461115 SOX10P56693 466 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 DLG4P78352 724 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 PTK2Q05397 1052 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 KLHL30Q0D2K2 578 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 RAPGEF1Q13905 1077 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 TTLL4Q14679 1199 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 BMS1Q14692 1282 aaKnown RBP11.81□□□□□ -0.52
IFT88-204ENST00000461115 SNRNP35Q16560 246 aaKnown RBP11.81□□□□□ -0.52
IFT88-204ENST00000461115 CCL15Q16663 113 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 LY6KQ17RY6 165 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 WHAMMP3Q1A5X7 153 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 FAM110CQ1W6H9 321 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 HSDL1Q3SXM5 330 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 MTERF2Q49AM1 385 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 CDCA2Q69YH5 1023 aaPredicted RBP11.81□□□□□ -0.52
IFT88-204ENST00000461115 TAPT1Q6NXT6 567 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 C15orf39Q6ZRI6 1047 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 CEP112Q8N8E3 955 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 SLC30A5Q8TAD4 765 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 SCFD2Q8WU76 684 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 SLC7A3Q8WY07 619 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 TSC1Q92574 1164 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 SPAG5Q96R06 1193 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 DEF6Q9H4E7 631 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 EFCC1Q9HA90 598 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 MLXIPQ9HAP2 919 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 TRIM10Q9UDY6 481 aa11.81□□□□□ -0.52
IFT88-204ENST00000461115 ADGRA2Q96PE1 1338 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 A0A087X0T9 212 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 FAM228BP0C875 321 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 TRIM49P0CI25 452 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 TRIM49CP0CI26 452 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 HOXD8P13378 290 aaPredicted RBP11.8□□□□□ -0.52
IFT88-204ENST00000461115 GPC3P51654 580 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 GFPT1Q06210 699 aaPredicted RBP11.8□□□□□ -0.52
IFT88-204ENST00000461115 POU5F1BQ06416 359 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 ARHGAP1Q07960 439 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 CYP24A1Q07973 514 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 CETN1Q12798 172 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 GRB14Q14449 540 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 KIF22Q14807 665 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 NAB2Q15742 525 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 IER5Q5VY09 327 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 SLFN12LQ6IEE8 588 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 PHLDB3Q6NSJ2 640 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 ZPBP2Q6X784 338 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 ARMCX2Q7L311 632 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 ZNF571Q7Z3V5 609 aaPredicted RBP11.8□□□□□ -0.52
IFT88-204ENST00000461115 SRGAP1Q7Z6B7 1085 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 USP37Q86T82 979 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 CBWD2Q8IUF1 395 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 GPD1LQ8N335 351 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 MSL3Q8N5Y2 521 aaKnown RBP11.8□□□□□ -0.52
IFT88-204ENST00000461115 C2orf69Q8N8R5 385 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 LRRN4CLQ8ND94 238 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 ZSWIM2Q8NEG5 633 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 TCP11Q8WWU5 503 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 PSPC1Q8WXF1 523 aaKnown RBP11.8□□□□□ -0.52
IFT88-204ENST00000461115 SECISBP2LQ93073 1101 aaKnown RBP11.8□□□□□ -0.52
IFT88-204ENST00000461115 JPH2Q9BR39 696 aaPredicted RBP11.8□□□□□ -0.52
IFT88-204ENST00000461115 CARD6Q9BX69 1037 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 TMEM117Q9H0C3 514 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 CCDC113Q9H0I3 377 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 PCIF1Q9H4Z3 704 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 AZI2Q9H6S1 392 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 TMEM8AQ9HCN3 771 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 DNAJC12Q9UKB3 198 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 JRKLQ9Y4A0 524 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 PCDHGC5Q9Y5F6 944 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 DUSP10Q9Y6W6 482 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 KAT6AQ92794 2004 aa11.8□□□□□ -0.52
IFT88-204ENST00000461115 A0A0A6YYK5 440 aaPredicted RBP11.79□□□□□ -0.52
IFT88-204ENST00000461115 EXTL3O43909 919 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 ADCY3O60266 1144 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 ZC3H11AO75152 810 aaKnown RBP eCLIP11.79□□□□□ -0.52
IFT88-204ENST00000461115 ITGBL1O95965 494 aaPredicted RBP11.79□□□□□ -0.52
IFT88-204ENST00000461115 CCDC172P0C7W6 258 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 H2AFXP16104 143 aaPredicted RBP11.79□□□□□ -0.52
IFT88-204ENST00000461115 ADORA2AP29274 412 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms