RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 TMEM62Q0P6H9 643 aa13.87□□□□□ -0.19
HDAC4-207ENST00000461113 MXD4Q14582 209 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-207ENST00000461113 HYIQ5T013 277 aa13.87□□□□□ -0.19
HDAC4-207ENST00000461113 LLGL2Q6P1M3 1020 aa13.87□□□□□ -0.19
HDAC4-207ENST00000461113 RHPN2Q8IUC4 686 aa13.87□□□□□ -0.19
HDAC4-207ENST00000461113 LINC01599Q8WXQ3 324 aa13.87□□□□□ -0.19
HDAC4-207ENST00000461113 ZBTB10Q96DT7 871 aa13.87□□□□□ -0.19
HDAC4-207ENST00000461113 PLIN2Q99541 437 aa13.87□□□□□ -0.19
HDAC4-207ENST00000461113 GCOM2Q9BZD3 368 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-207ENST00000461113 INO80BQ9C086 356 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-207ENST00000461113 BMP2KQ9NSY1 1161 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-207ENST00000461113 KCNG1Q9UIX4 513 aa13.87□□□□□ -0.19
HDAC4-207ENST00000461113 CDH22Q9UJ99 828 aa13.87□□□□□ -0.19
HDAC4-207ENST00000461113 SQORQ9Y6N5 450 aa13.87□□□□□ -0.19
HDAC4-207ENST00000461113 A0A087WWV3 80 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 IGKV6-21A0A0C4DH24 114 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 FSD2A1L4K1 749 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 ZBTB39O15060 712 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 PI15O43692 258 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 VTNP04004 478 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 KRT18P05783 430 aaKnown RBP13.86□□□□□ -0.19
HDAC4-207ENST00000461113 ASGR2P07307 311 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 CYP11B2P19099 503 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 DDIT3P35638 169 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 GATMP50440 423 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 CRYBB1P53674 252 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-207ENST00000461113 NLRP11P59045 1033 aaKnown RBP13.86□□□□□ -0.19
HDAC4-207ENST00000461113 ERVFC1P60507 584 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 CACNB1Q02641 598 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-207ENST00000461113 MGAT3Q09327 533 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 KARSQ15046 597 aaKnown RBP13.86□□□□□ -0.19
HDAC4-207ENST00000461113 SPECC1Q5M775 1068 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 FAM102BQ5T8I3 360 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 CWF19L1Q69YN2 538 aaKnown RBP13.86□□□□□ -0.19
HDAC4-207ENST00000461113 TMEM184AQ6ZMB5 413 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 RTN4RL1Q86UN2 441 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-207ENST00000461113 ZNF410Q86VK4 478 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 NPAS4Q8IUM7 802 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 CCDC105Q8IYK2 499 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 CRIPAKQ8N1N5 446 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 LEO1Q8WVC0 666 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-207ENST00000461113 TMEM143Q96AN5 459 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 IFT74Q96LB3 600 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 MMTAG2Q9BU76 263 aaKnown RBP13.86□□□□□ -0.19
HDAC4-207ENST00000461113 TIPINQ9BVW5 301 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 LRRC27Q9C0I9 530 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 KCND2Q9NZV8 630 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 STK17AQ9UEE5 414 aa13.86□□□□□ -0.19
HDAC4-207ENST00000461113 EP300Q09472 2414 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-207ENST00000461113 E9PMD0 336 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 GPR182O15218 404 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 PLA2G4BP0C869 781 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 PLCG1P19174 1290 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 STAT6P42226 847 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 UBE3AQ05086 875 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 GRIN1Q05586 938 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 NCBP1Q09161 790 aaKnown RBP13.85□□□□□ -0.19
HDAC4-207ENST00000461113 PAK2Q13177 524 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 KCNC3Q14003 757 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 PPP2R5AQ15172 486 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 ECM1Q16610 540 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 KIZQ2M2Z5 673 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 TMEM119Q4V9L6 283 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 FBXO47Q5MNV8 452 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 TSHZ1Q6ZSZ6 1077 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 MAEAQ7L5Y9 396 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 KIFAP3Q92845 792 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 CCDC34Q96HJ3 373 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 EPSTI1Q96J88 318 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 NLRP4Q96MN2 994 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 DLL3Q9NYJ7 618 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 PCDHA7Q9UN72 937 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 COL4A3BPQ9Y5P4 624 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 KAT6AQ92794 2004 aa13.85□□□□□ -0.19
HDAC4-207ENST00000461113 MYH9P35579 1960 aaKnown RBP13.84□□□□□ -0.19
HDAC4-207ENST00000461113 RPS6KA5O75582 802 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 STAG3L1P0CL83 205 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 SRGAP2CP0DJJ0 459 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 AOC1P19801 751 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 CD52P31358 61 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 PHKA2P46019 1235 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 GPC3P51654 580 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 AMPD3Q01432 767 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 NFX1Q12986 1120 aaKnown RBP13.84□□□□□ -0.19
HDAC4-207ENST00000461113 DHX8Q14562 1220 aaKnown RBP13.84□□□□□ -0.19
HDAC4-207ENST00000461113 SPOUT1Q5T280 376 aaKnown RBP13.84□□□□□ -0.19
HDAC4-207ENST00000461113 ADALQ6DHV7 355 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 SV2BQ7L1I2 683 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 LINC01465Q8N7H1 131 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 SYT2Q8N9I0 419 aaPredicted RBP13.84□□□□□ -0.19
HDAC4-207ENST00000461113 IQUBQ8NA54 791 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 DTWD2Q8NBA8 298 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 PRPF31Q8WWY3 499 aaKnown RBP13.84□□□□□ -0.19
HDAC4-207ENST00000461113 LARP4BQ92615 738 aaKnown RBP13.84□□□□□ -0.19
HDAC4-207ENST00000461113 RAD54LQ92698 747 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 DRC1Q96MC2 740 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 PNMA5Q96PV4 448 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 CEP89Q96ST8 783 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 PPP1R16BQ96T49 567 aa13.84□□□□□ -0.19
HDAC4-207ENST00000461113 OSMRQ99650 979 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms