RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ARHGEF39Q8N4T4 335 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 CRACR2BQ8N4Y2 399 aaPredicted RBP5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 LZTR1Q8N653 840 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 ADCY4Q8NFM4 1077 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 GRAPLQ8TC17 118 aaPredicted RBP5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 ALG3Q92685 438 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 CRAMP1Q96RY5 1269 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 IER2Q9BTL4 223 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 PLA2G12BQ9BX93 195 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 INTS7Q9NVH2 962 aaKnown RBP5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 POLLQ9UGP5 575 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 G3BP2Q9UN86 482 aaKnown RBP5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 MAPRE3Q9UPY8 281 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 ARFGEF1Q9Y6D6 1849 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 DUOX1Q9NRD9 1551 aa5.76□□□□□ -1.49
ATPAF1-203ENST00000460928 RIC1Q4ADV7 1423 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 SNED1Q8TER0 1413 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 SBF1O95248 1867 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 FER1L6Q2WGJ9 1857 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 TRBV23OR9-2A0A075B6M9 112 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 GSG1L2A8MUP6 293 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 PRICKLE3O43900 615 aaPredicted RBP5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 GNAI2P04899 355 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 HSPA8P11142 646 aaKnown RBP5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 RTP5Q14D33 572 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 RABL6Q3YEC7 729 aaPredicted RBP5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 CEP85Q6P2H3 762 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 LRRTM3Q86VH5 581 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 TRIM59Q8IWR1 403 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 BTN2A2Q8WVV5 523 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 GCC1Q96CN9 775 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 PEX11GQ96HA9 241 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 MTA3Q9BTC8 594 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 BDH2Q9BUT1 245 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 TARS2Q9BW92 718 aaKnown RBP5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 ZBTB40Q9NUA8 1239 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 MAGEC2Q9UBF1 373 aaPredicted RBP5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 CGGBP1Q9UFW8 167 aaPredicted RBP5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 NUDT5Q9UKK9 219 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 ATP6V0A2Q9Y487 856 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 BACE2Q9Y5Z0 518 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 A0A1B0GUL6 1792 aa5.75□□□□□ -1.49
ATPAF1-203ENST00000460928 ANKRD18BA2A2Z9 1011 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 C2orf71A6NGG8 1288 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 STXBP3O00186 592 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 DLX3O60479 287 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 KCNH1O95259 989 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 GNAI3P08754 354 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 PTMSP20962 102 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 PMLP29590 882 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 ADORA1P30542 326 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 ALDH1B1P30837 517 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 MC3RP41968 323 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 SEPHS1P49903 392 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 ATP8B2P98198 1209 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 PLP2Q04941 152 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 CHRNDQ07001 517 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 IFIT5Q13325 482 aaKnown RBP5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 CCDC57Q2TAC2 916 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 TRIM61Q5EBN2 209 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 LDHAL6AQ6ZMR3 332 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 ATG9AQ7Z3C6 839 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 MTERF4Q7Z6M4 381 aaKnown RBP5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 SKAP1Q86WV1 359 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 ANKRD18AQ8IVF6 992 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 SLC7A14Q8TBB6 771 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 DDX1Q92499 740 aaKnown RBP5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 CEP89Q96ST8 783 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 SPATA25Q9BR10 227 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 MXD3Q9BW11 206 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 CNNM1Q9NRU3 951 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 FBLN5Q9UBX5 448 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 NDOR1Q9UHB4 597 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 SFMBT1Q9UHJ3 866 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 MCM8Q9UJA3 840 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 EXOC6BQ9Y2D4 811 aa5.74□□□□□ -1.49
ATPAF1-203ENST00000460928 SCN9AQ15858 1988 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 CNTNAP1P78357 1384 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 RTL9Q8NET4 1388 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 A0A1B0GTL3 188 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 SHTN1A0MZ66 631 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 CLGNO14967 610 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 BBOX1O75936 387 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 DNAJC8O75937 253 aaPredicted RBP5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 UFL1O94874 794 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 PTMAP06454 111 aaKnown RBP5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 C6orf222P0C671 652 aaPredicted RBP5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 IGHMBP2P38935 993 aaKnown RBP5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 GABREP78334 506 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 AMPD2Q01433 879 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 EXOSC10Q01780 885 aaKnown RBP5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 CACNB2Q08289 660 aaPredicted RBP5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 TFCP2Q12800 502 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 SF1Q15637 639 aaKnown RBP5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 CCDC93Q567U6 631 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 BRDTQ58F21 947 aaPredicted RBP5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 NT5DC1Q5TFE4 455 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 CCDC181Q5TID7 509 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 GTF2IRD2BQ6EKJ0 949 aa5.73□□□□□ -1.49
ATPAF1-203ENST00000460928 DPP8Q6V1X1 898 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms