RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ZNF302Q9NR11 478 aa15.31■□□□□ 0.04
ERCC3-205ENST00000460485 PDLIM7Q9NR12 457 aa15.31■□□□□ 0.04
ERCC3-205ENST00000460485 NENFQ9UMX5 172 aa15.31■□□□□ 0.04
ERCC3-205ENST00000460485 IGKV6D-21A0A0A0MT36 114 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 GRID2IPA4D2P6 1211 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 ZSWIM8A7E2V4 1837 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 ZC3H11AO75152 810 aaKnown RBP eCLIP15.3■□□□□ 0.04
ERCC3-205ENST00000460485 STBD1O95210 358 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 OATP04181 439 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 ATP1A1P05023 1023 aaKnown RBP15.3■□□□□ 0.04
ERCC3-205ENST00000460485 GRK4P32298 578 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 BMP8BP34820 402 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 MXI1P50539 228 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 NAA30Q147X3 362 aaPredicted RBP15.3■□□□□ 0.04
ERCC3-205ENST00000460485 C17orf99Q6UX52 265 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 GADL1Q6ZQY3 521 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 CAGE1Q8TC20 777 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 CNKSR2Q8WXI2 1034 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 LRCH3Q96II8 777 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 JPH2Q9BR39 696 aaPredicted RBP15.3■□□□□ 0.04
ERCC3-205ENST00000460485 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.3■□□□□ 0.04
ERCC3-205ENST00000460485 NIFKQ9BYG3 293 aaKnown RBP15.3■□□□□ 0.04
ERCC3-205ENST00000460485 ARHGAP28Q9P2N2 729 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 TRIM10Q9UDY6 481 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 SEPT9Q9UHD8 586 aaPredicted RBP15.3■□□□□ 0.04
ERCC3-205ENST00000460485 PLXNA1Q9UIW2 1896 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 SLC45A1Q9Y2W3 748 aa15.3■□□□□ 0.04
ERCC3-205ENST00000460485 SLC16A4O15374 487 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 PIGRP01833 764 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 CCL5P13501 91 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 ERCC3P19447 782 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 PAFAH1B1P43034 410 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 NAMPTP43490 491 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 SLC26A2P50443 739 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 PTK2Q05397 1052 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 CLUL1Q15846 466 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 KIAA0753Q2KHM9 967 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 EPC2Q52LR7 807 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 TREML2Q5T2D2 321 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 SLFN12LQ6IEE8 588 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 SWSAP1Q6NVH7 229 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 ENOSF1Q7L5Y1 443 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 CCDC60Q8IWA6 550 aaPredicted RBP15.29■□□□□ 0.04
ERCC3-205ENST00000460485 KRT222Q8N1A0 295 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 LRRN4CLQ8ND94 238 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 RNF208Q9H0X6 261 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 NRBP2Q9NSY0 501 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 NAGPAQ9UK23 515 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 DNAJC12Q9UKB3 198 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 STXBP5LQ9Y2K9 1186 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 COQ4Q9Y3A0 265 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 CAPN6Q9Y6Q1 641 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 PLXNB2O15031 1838 aa15.29■□□□□ 0.04
ERCC3-205ENST00000460485 NCANO14594 1321 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 EMSYQ7Z589 1322 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 SYNGAP1Q96PV0 1343 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 A0A087X0T9 212 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 DENND3A2RUS2 1198 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 CCDC169A6NNP5 214 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 BTBD19C9JJ37 291 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 ZNF862O60290 1169 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 EVI5O60447 810 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 ZRANB2O95218 330 aaKnown RBP eCLIP15.28■□□□□ 0.04
ERCC3-205ENST00000460485 LDHAP00338 332 aaKnown RBP15.28■□□□□ 0.04
ERCC3-205ENST00000460485 ABL1P00519 1130 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 H2AFZP0C0S5 128 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 FAM228BP0C875 321 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 PSMC4P43686 418 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 POLGP54098 1239 aaPredicted RBP15.28■□□□□ 0.04
ERCC3-205ENST00000460485 STRN3Q13033 797 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 SNAPC2Q13487 334 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 EMC2Q15006 297 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 SNRNP35Q16560 246 aaKnown RBP15.28■□□□□ 0.04
ERCC3-205ENST00000460485 UTP14CQ5TAP6 766 aaKnown RBP15.28■□□□□ 0.04
ERCC3-205ENST00000460485 PLA2G4FQ68DD2 849 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 KRT39Q6A163 491 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 ALKBH5Q6P6C2 394 aaKnown RBP15.28■□□□□ 0.04
ERCC3-205ENST00000460485 METTL7BQ6UX53 244 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 H2AFVQ71UI9 128 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 GPD1LQ8N335 351 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 RAET1EQ8TD07 263 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 MORC4Q8TE76 937 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 SLC7A3Q8WY07 619 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 MFSD14AQ96MC6 490 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 ASCC2Q9H1I8 757 aaPredicted RBP15.28■□□□□ 0.04
ERCC3-205ENST00000460485 ACBD3Q9H3P7 528 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 DHX33Q9H6R0 707 aaKnown RBP15.28■□□□□ 0.04
ERCC3-205ENST00000460485 TMEM8AQ9HCN3 771 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 ADAMTS1Q9UHI8 967 aa15.28■□□□□ 0.04
ERCC3-205ENST00000460485 PUF60Q9UHX1 559 aaKnown RBP15.28■□□□□ 0.04
ERCC3-205ENST00000460485 FARP2O94887 1054 aaPredicted RBP15.27■□□□□ 0.04
ERCC3-205ENST00000460485 MOCS3O95396 460 aa15.27■□□□□ 0.04
ERCC3-205ENST00000460485 SGPL1O95470 568 aa15.27■□□□□ 0.04
ERCC3-205ENST00000460485 ACTN1P12814 892 aa15.27■□□□□ 0.04
ERCC3-205ENST00000460485 CNGA1P29973 690 aa15.27■□□□□ 0.04
ERCC3-205ENST00000460485 GPS2Q13227 327 aa15.27■□□□□ 0.04
ERCC3-205ENST00000460485 KCTD2Q14681 263 aa15.27■□□□□ 0.04
ERCC3-205ENST00000460485 DRAP1Q14919 205 aaPredicted RBP15.27■□□□□ 0.04
ERCC3-205ENST00000460485 GLE1Q53GS7 698 aaKnown RBP15.27■□□□□ 0.04
ERCC3-205ENST00000460485 CCDC181Q5TID7 509 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms