RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TSPAN1O60635 241 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 GNA14O95837 355 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 CXCL10P02778 98 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 MCF2P10911 925 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 CCL23P55773 120 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 FKBP3Q00688 224 aaKnown RBP13.5□□□□□ -0.25
HDAC4-206ENST00000460235 FPGSQ05932 587 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 NFIL3Q16649 462 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 PLEKHG4Q58EX7 1191 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 CENPPQ6IPU0 288 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 KLHL10Q6JEL2 608 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 CNKSR3Q6P9H4 555 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 FAM228AQ86W67 206 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 NELFCDQ8IXH7 590 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 C12orf56Q8IXR9 622 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 ANKRD20A12PQ8NF67 263 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 TMEM174Q8WUU8 243 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 NELFBQ8WX92 580 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 POMGNT1Q8WZA1 660 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 WNT8BQ93098 351 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 PGBD4Q96DM1 585 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 ZNF668Q96K58 619 aaPredicted RBP13.5□□□□□ -0.25
HDAC4-206ENST00000460235 TRAIPQ9BWF2 469 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 TSPY26PQ9H489 355 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 CDHR5Q9HBB8 845 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 ERVK-5Q9HDB9 667 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 UBN1Q9NPG3 1134 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 TRAF3IP3Q9Y228 551 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 BAIAP3O94812 1187 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 STAG3L1P0CL83 205 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 ARF4P18085 180 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-206ENST00000460235 CD52P31358 61 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 CASP5P51878 434 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 YARSP54577 528 aaKnown RBP13.49□□□□□ -0.25
HDAC4-206ENST00000460235 ZNF445P59923 1031 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 NOLC1Q14978 699 aaKnown RBP eCLIP13.49□□□□□ -0.25
HDAC4-206ENST00000460235 ZNF568Q3ZCX4 644 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 PSRC1Q6PGN9 363 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-206ENST00000460235 LRSAM1Q6UWE0 723 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 SLC9A9Q8IVB4 645 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 HPS3Q969F9 1004 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 CEP63Q96MT8 703 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 TSPAN18Q96SJ8 248 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 BPIFA3Q9BQP9 254 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 MSTO1Q9BUK6 570 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 CCDC94Q9BW85 323 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-206ENST00000460235 TARS2Q9BW92 718 aaKnown RBP13.49□□□□□ -0.25
HDAC4-206ENST00000460235 GZF1Q9H116 711 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-206ENST00000460235 MINDY3Q9H8M7 445 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 IL23AQ9NPF7 189 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 TOPORSQ9NS56 1045 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-206ENST00000460235 MAPK8IP1Q9UQF2 711 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 STYXL1Q9Y6J8 313 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 HTTP42858 3142 aa13.49□□□□□ -0.25
HDAC4-206ENST00000460235 TRIM43BA6NCK2 446 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 PPP1R3GB7ZBB8 358 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 OGTO15294 1046 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 HOXA2O43364 376 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 EOMESO95936 686 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 TPM2P07951 284 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 ZNF165P49910 485 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 MCL1Q07820 350 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 ADAM9Q13443 819 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 SURF1Q15526 300 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 DPCR1Q3MIW9 517 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 TRAF7Q6Q0C0 670 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 SLC24A5Q71RS6 500 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 CD302Q8IX05 232 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 XXYLT1Q8NBI6 393 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 ENOX1Q8TC92 643 aaKnown RBP13.48□□□□□ -0.25
HDAC4-206ENST00000460235 TMEM40Q8WWA1 233 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 TRIM43Q96BQ3 446 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-206ENST00000460235 WNT8AQ9H1J5 351 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 KCTD10Q9H3F6 313 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 METTL14Q9HCE5 456 aaKnown RBP13.48□□□□□ -0.25
HDAC4-206ENST00000460235 AGPAT3Q9NRZ7 376 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 ANKFY1Q9P2R3 1169 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 MAGEC2Q9UBF1 373 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-206ENST00000460235 AGO2Q9UKV8 859 aaKnown RBP13.48□□□□□ -0.25
HDAC4-206ENST00000460235 CTNND2Q9UQB3 1225 aa13.48□□□□□ -0.25
HDAC4-206ENST00000460235 A0A0B4J269 797 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 ZNF233A6NK53 670 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 GOLGA6L19H0YKK7 550 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 MAPK13O15264 365 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 EXOC3O60645 756 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 NBNO60934 754 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 ZNF623O75123 536 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 FGBP02675 491 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 NR3C1P04150 777 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 CLTAP09496 248 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 EPB41P11171 864 aaKnown RBP13.47□□□□□ -0.25
HDAC4-206ENST00000460235 NR2F2P24468 414 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 KCNJ6P48051 423 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 MYL5Q02045 173 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 AMHR2Q16671 573 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 ANO6Q4KMQ2 910 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 SPATA1Q5VX52 437 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 TAS1R3Q7RTX0 852 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 DEFB128Q7Z7B8 93 aa13.47□□□□□ -0.25
HDAC4-206ENST00000460235 SMYD4Q8IYR2 804 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms