RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 MEI1Q5TIA1 1274 aa17.08■□□□□ 0.33
CMTM3-203ENST00000460097 NLRX1Q86UT6 975 aa17.08■□□□□ 0.33
CMTM3-203ENST00000460097 GUF1Q8N442 669 aaKnown RBP17.08■□□□□ 0.33
CMTM3-203ENST00000460097 CASKIN2Q8WXE0 1202 aa17.08■□□□□ 0.33
CMTM3-203ENST00000460097 SGSM3Q96HU1 749 aa17.08■□□□□ 0.33
CMTM3-203ENST00000460097 GNEQ9Y223 722 aaKnown RBP17.08■□□□□ 0.33
CMTM3-203ENST00000460097 CCDC194A0A1B0GVG4 234 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 ADCY6O43306 1168 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 TGFB3P10600 412 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 SLC8A1P32418 973 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 GUCY2DQ02846 1103 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 SNCBQ16143 134 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 C10orf76Q5T2E6 689 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 HGSNATQ68CP4 663 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 TTC19Q6DKK2 380 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-203ENST00000460097 CCDC62Q6P9F0 684 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 KRT25Q7Z3Z0 450 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 LENG1Q96BZ8 264 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-203ENST00000460097 SPC25Q9HBM1 224 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 SUFUQ9UMX1 484 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 Q9Y3F1 56 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 H0YGN5 161 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 NKRFO15226 690 aaKnown RBP eCLIP17.07■□□□□ 0.322e-6■■■□□ 16.7
CMTM3-203ENST00000460097 DYNC1LI2O43237 492 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-203ENST00000460097 SERPING1P05155 500 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 CYP3A4P08684 503 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 FAM153BP0C7A2 387 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 MYZAPP0CAP1 466 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 ITGB5P18084 799 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 ZNF76P36508 570 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 MATR3P43243 847 aaKnown RBP eCLIP17.07■□□□□ 0.32
CMTM3-203ENST00000460097 STK4Q13043 487 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 XRCC4Q13426 336 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 LY6KQ17RY6 165 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 FAM153CQ494X1 144 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 TMEM63BQ5T3F8 832 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 CABP7Q86V35 215 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 ARRDC4Q8NCT1 418 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 RASSF8Q8NHQ8 419 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 CRYGNQ8WXF5 182 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 CENPTQ96BT3 561 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 SEMA6BQ9H3T3 888 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 CEP72Q9P209 647 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 FAM153AQ9UHL3 310 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 UBIAD1Q9Y5Z9 338 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 NFS1Q9Y697 457 aa17.07■□□□□ 0.32
CMTM3-203ENST00000460097 LRRC53A6NM62 1247 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 DNAJC8O75937 253 aaPredicted RBP17.06■□□□□ 0.32
CMTM3-203ENST00000460097 ARIH2O95376 493 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 PGK1P00558 417 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
CMTM3-203ENST00000460097 ICAM3P32942 547 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 USP11P51784 963 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 NONOQ15233 471 aaKnown RBP eCLIP17.06■□□□□ 0.32
CMTM3-203ENST00000460097 CEP55Q53EZ4 464 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 KCTD16Q68DU8 428 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 RNF180Q86T96 592 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 PARP9Q8IXQ6 854 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 USP38Q8NB14 1042 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 TBCKQ8TEA7 893 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 PBKQ96KB5 322 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 MXRA8Q9BRK3 442 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 AP5M1Q9H0R1 490 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 KDM4CQ9H3R0 1056 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 STK17AQ9UEE5 414 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 SALL4Q9UJQ4 1053 aa17.06■□□□□ 0.32
CMTM3-203ENST00000460097 SPATA31C2B4DYI2 1134 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 MAFGO15525 162 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 PLCG1P19174 1290 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 GJA9P57773 515 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 IFT88Q13099 833 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 PSMD2Q13200 908 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 CRYMQ14894 314 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 GJC2Q5T442 439 aaPredicted RBP17.05■□□□□ 0.32
CMTM3-203ENST00000460097 RNF187Q5TA31 235 aaPredicted RBP17.05■□□□□ 0.32
CMTM3-203ENST00000460097 UNC13DQ70J99 1090 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 TLK2Q86UE8 772 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 FUKQ8N0W3 1084 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 ANKLE1Q8NAG6 615 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 ACTRT1Q8TDG2 376 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 GPRASP2Q96D09 838 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 CDHR1Q96JP9 859 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 LRRC27Q9C0I9 530 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 TMEM60Q9H2L4 133 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 CNOT10Q9H9A5 744 aaKnown RBP17.05■□□□□ 0.32
CMTM3-203ENST00000460097 PLAAQ9Y263 795 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 LRRC37A2A6NM11 1700 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 E7EVH7 732 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 C6orf222P0C671 652 aaPredicted RBP17.05■□□□□ 0.32
CMTM3-203ENST00000460097 ANXA13P27216 316 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 CXCR5P32302 372 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 ASIC1P78348 528 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 MTMR1Q13613 665 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 LRRC41Q15345 812 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 ANKRD20A8PQ5CZ79 823 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 CYB5D1Q6P9G0 228 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 RRAGAQ7L523 313 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 KIAA0895Q8NCT3 520 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 CYP2W1Q8TAV3 490 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 COPS5Q92905 334 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms