RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 PIGOQ8TEQ8 1089 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 SLC7A3Q8WY07 619 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 MSLNLQ96KJ4 702 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 TIGD1Q96MW7 591 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 PANK2Q9BZ23 570 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 CUEDC2Q9H467 287 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 TLR9Q9NR96 1032 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 FAM105AQ9NUU6 356 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 DDX19AQ9NUU7 478 aaKnown RBP17.24■□□□□ 0.35
SDF4-204ENST00000459994 BARX2Q9UMQ3 279 aaPredicted RBP17.24■□□□□ 0.35
SDF4-204ENST00000459994 DNM3Q9UQ16 869 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 TRIP11Q15643 1979 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 EOMESO95936 686 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 HOXA11P31270 313 aaPredicted RBP17.23■□□□□ 0.35
SDF4-204ENST00000459994 STAT6P42226 847 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 AFF1P51825 1210 aaKnown RBP17.23■□□□□ 0.35
SDF4-204ENST00000459994 PLPP4Q5VZY2 271 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 POTEGQ6S5H5 508 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 TMEM173Q86WV6 379 aaPredicted RBP17.23■□□□□ 0.35
SDF4-204ENST00000459994 LRRC43Q8N309 656 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 GPT2Q8TD30 523 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 PSPC1Q8WXF1 523 aaKnown RBP17.23■□□□□ 0.35
SDF4-204ENST00000459994 DHX58Q96C10 678 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 MTRQ99707 1265 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 C11orf16Q9NQ32 467 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 CHST12Q9NRB3 414 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 AAASQ9NRG9 546 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 ANKEF1Q9NU02 776 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 BLOC1S4Q9NUP1 217 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 AGPAT5Q9NUQ2 364 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 DACT1Q9NYF0 836 aa17.23■□□□□ 0.35
SDF4-204ENST00000459994 HIDE1A8MVS5 230 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 NR1I2O75469 434 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 EYA4O95677 639 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 SLFN14P0C7P3 912 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 RARRES1P49788 294 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 CDC42EP1Q00587 391 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 SKOR2Q2VWA4 1001 aaPredicted RBP17.22■□□□□ 0.35
SDF4-204ENST00000459994 AGMOQ6ZNB7 445 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 OTUD6AQ7L8S5 288 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 KCNK18Q7Z418 384 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 ABI1Q8IZP0 508 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 SLC39A11Q8N1S5 342 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 EFHBQ8N7U6 833 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 RNF149Q8NC42 400 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 MICAL1Q8TDZ2 1067 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 LRRC15Q8TF66 581 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 BCL7CQ8WUZ0 217 aaPredicted RBP17.22■□□□□ 0.35
SDF4-204ENST00000459994 RAD54LQ92698 747 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 ZNF558Q96NG5 402 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 PLIN2Q99541 437 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 JPH2Q9BR39 696 aaPredicted RBP17.22■□□□□ 0.35
SDF4-204ENST00000459994 TRAIPQ9BWF2 469 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 MAGEF1Q9HAY2 307 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
SDF4-204ENST00000459994 DBR1Q9UK59 544 aaKnown RBP17.22■□□□□ 0.35
SDF4-204ENST00000459994 PLXNA3P51805 1871 aa17.22■□□□□ 0.35
SDF4-204ENST00000459994 FAM86C2PA6NEL3 165 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 HOXA2O43364 376 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 ACTN4O43707 911 aaKnown RBP17.21■□□□□ 0.35
SDF4-204ENST00000459994 KINO60870 393 aaKnown RBP17.21■□□□□ 0.35
SDF4-204ENST00000459994 OFD1O75665 1012 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 NDUFV1P49821 464 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 BCAR1P56945 870 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 PLCB3Q01970 1234 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 UBE3AQ05086 875 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 ZP2Q05996 745 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 CAPSQ13938 189 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 KRBA2Q6ZNG9 492 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 ELOA2Q8IYF1 753 aaPredicted RBP17.21■□□□□ 0.35
SDF4-204ENST00000459994 CEP57L1Q8IYX8 460 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 GJD3Q8N144 294 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 CPB2Q96IY4 423 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 INO80BQ9C086 356 aaPredicted RBP17.21■□□□□ 0.35
SDF4-204ENST00000459994 NRDE2Q9H7Z3 1164 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 GPRC5CQ9NQ84 441 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 DNAJB4Q9UDY4 337 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 SERTAD1Q9UHV2 236 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 CD207Q9UJ71 328 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 INPP5FQ9Y2H2 1132 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 PPME1Q9Y570 386 aa17.21■□□□□ 0.35
SDF4-204ENST00000459994 MYH11P35749 1972 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 E9PMD0 336 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 NCK2O43639 380 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 USO1O60763 962 aaKnown RBP17.2■□□□□ 0.34
SDF4-204ENST00000459994 COL9A1P20849 921 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 GLRA2P23416 452 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 ARL2P36404 184 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 SMAD2Q15796 467 aaKnown RBP17.2■□□□□ 0.34
SDF4-204ENST00000459994 DUSP6Q16828 381 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 KLHL40Q2TBA0 621 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 KANK3Q6NY19 840 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 MAEAQ7L5Y9 396 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 SRGAP1Q7Z6B7 1085 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 ZNF280BQ86YH2 543 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 SMG8Q8ND04 991 aaKnown RBP17.2■□□□□ 0.34
SDF4-204ENST00000459994 TCP11Q8WWU5 503 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 LARP4BQ92615 738 aaKnown RBP17.2■□□□□ 0.34
SDF4-204ENST00000459994 CCDC34Q96HJ3 373 aa17.2■□□□□ 0.34
SDF4-204ENST00000459994 TCF25Q9BQ70 676 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms