RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 ATP8B4Q8TF62 1192 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 CHURC1Q8WUH1 139 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 UBLCP1Q8WVY7 318 aaPredicted RBP6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 HVCN1Q96D96 273 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 CHMP6Q96FZ7 201 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 ZBED3Q96IU2 234 aaPredicted RBP6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 SEC16BQ96JE7 1060 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 XPO6Q96QU8 1125 aaKnown RBP6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 P2RX7Q99572 595 aaKnown RBP6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 NCAPGQ9BPX3 1015 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 HINFPQ9BQA5 517 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 PLCD4Q9BRC7 762 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 RUSC1Q9BVN2 902 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 PLVAPQ9BX97 442 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 AP1M1Q9BXS5 423 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 NEUROG2Q9H2A3 272 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 NMRK2Q9NPI5 230 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 AGPAT3Q9NRZ7 376 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 MAP3K20Q9NYL2 800 aaKnown RBP6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 UVRAGQ9P2Y5 699 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 DDX20Q9UHI6 824 aaKnown RBP6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 DBR1Q9UK59 544 aaKnown RBP6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 AJAP1Q9UKB5 411 aaPredicted RBP6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 MTUS1Q9ULD2 1270 aa6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 MRPL11Q9Y3B7 192 aaKnown RBP6.61□□□□□ -1.35
UBQLN4-202ENST00000459954 RSPH10B2B2RC85 870 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 EML1O00423 815 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 WNT10BO00744 389 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 CLIC2O15247 247 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 TCEA3O75764 348 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 CAPN15O75808 1086 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 RSPH10BP0C881 870 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 POLR2MP0CAP2 368 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ITGA4P13612 1032 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ERCC3P19447 782 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 DRD4P21917 467 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ATP5DP30049 168 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ABCD1P33897 745 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 MAN1A1P33908 653 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 PEX5P50542 639 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 SEC24CP53992 1094 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 C1QTNF8P60827 252 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 MAGOHP61326 146 aaKnown RBP6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 CAV1Q03135 178 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ENOX2Q16206 610 aaKnown RBP6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ZNF568Q3ZCX4 644 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 EPC2Q52LR7 807 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 RBM26Q5T8P6 1007 aaKnown RBP6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 SEL1L2Q5TEA6 688 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 DCAF12L1Q5VU92 463 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 LRCH2Q5VUJ6 765 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 DENND2CQ68D51 928 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 KCNV1Q6PIU1 500 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 CEP128Q6ZU80 1094 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 TAOK1Q7L7X3 1001 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 PIGWQ7Z7B1 504 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 FAM160B2Q86V87 743 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 DDX42Q86XP3 938 aaKnown RBP eCLIP6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 JAMLQ86YT9 394 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 CLEC10AQ8IUN9 316 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 KIAA0825Q8IV33 1275 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 GLYCTKQ8IVS8 523 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 CCDC13Q8IYE1 715 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ANKS4BQ8N8V4 417 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 CCT6BQ92526 530 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 RAPGEF5Q92565 580 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 DHX38Q92620 1227 aaKnown RBP6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 CD101Q93033 1021 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 GJA10Q969M2 543 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 MAGOHBQ96A72 148 aaKnown RBP6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 SGSM3Q96HU1 749 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 DYDC2Q96IM9 177 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ZNF317Q96PQ6 595 aaPredicted RBP6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ACCSQ96QU6 501 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ZSWIM1Q9BR11 485 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 TEKT3Q9BXF9 490 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 RANBP17Q9H2T7 1088 aaKnown RBP6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ARHGEF10LQ9HCE6 1279 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 PPANQ9NQ55 473 aaKnown RBP6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 KLC4Q9NSK0 619 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 LARSQ9P2J5 1176 aaKnown RBP6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 FAM198AQ9UFP1 575 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 PNMA2Q9UL42 364 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 PPP1R9AQ9ULJ8 1098 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 PRR12Q9ULL5 1215 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 NOVA2Q9UNW9 492 aaKnown RBP6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 CLEC11AQ9Y240 323 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ZBTB12Q9Y330 459 aaPredicted RBP6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 COQ4Q9Y3A0 265 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 PCDHA3Q9Y5H8 950 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 ALG6Q9Y672 507 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 DOCK5Q9H7D0 1870 aa6.6□□□□□ -1.35
UBQLN4-202ENST00000459954 PASKQ96RG2 1323 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 CFAP73A6NFT4 308 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 DDTLA6NHG4 134 aaPredicted RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 CCT8L1PA6NM43 557 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 ANKRD65E5RJM6 399 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 FOXN3O00409 490 aaPredicted RBP6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 FSCN2O14926 492 aa6.59□□□□□ -1.35
UBQLN4-202ENST00000459954 GAS7O60861 476 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms