RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 LEO1Q8WVC0 666 aaPredicted RBP23.95■■□□□ 1.42
SSNA1-202ENST00000459860 SPIRE2Q8WWL2 714 aa23.95■■□□□ 1.42
SSNA1-202ENST00000459860 PYM1Q9BRP8 204 aaKnown RBP23.95■■□□□ 1.42
SSNA1-202ENST00000459860 ADPGKQ9BRR6 497 aa23.95■■□□□ 1.42
SSNA1-202ENST00000459860 MRPL9Q9BYD2 267 aaKnown RBP23.95■■□□□ 1.42
SSNA1-202ENST00000459860 CUEDC2Q9H467 287 aa23.95■■□□□ 1.42
SSNA1-202ENST00000459860 PARVGQ9HBI0 331 aa23.95■■□□□ 1.42
SSNA1-202ENST00000459860 RAPGEFL1Q9UHV5 662 aa23.95■■□□□ 1.42
SSNA1-202ENST00000459860 MRPL42Q9Y6G3 142 aaKnown RBP23.95■■□□□ 1.42
SSNA1-202ENST00000459860 BDP1A6H8Y1 2624 aa23.95■■□□□ 1.42
SSNA1-202ENST00000459860 PRRC2BQ5JSZ5 2229 aaKnown RBP23.94■■□□□ 1.42
SSNA1-202ENST00000459860 ATF7P17544 494 aaPredicted RBP23.94■■□□□ 1.42
SSNA1-202ENST00000459860 EPC2Q52LR7 807 aa23.94■■□□□ 1.42
SSNA1-202ENST00000459860 UBXN11Q5T124 520 aa23.94■■□□□ 1.42
SSNA1-202ENST00000459860 GLB1LQ6UWU2 654 aa23.94■■□□□ 1.42
SSNA1-202ENST00000459860 APBB1IPQ7Z5R6 666 aaPredicted RBP23.94■■□□□ 1.42
SSNA1-202ENST00000459860 LRRC43Q8N309 656 aa23.94■■□□□ 1.42
SSNA1-202ENST00000459860 IQUBQ8NA54 791 aa23.94■■□□□ 1.42
SSNA1-202ENST00000459860 HELQQ8TDG4 1101 aa23.94■■□□□ 1.42
SSNA1-202ENST00000459860 LRRC27Q9C0I9 530 aa23.94■■□□□ 1.42
SSNA1-202ENST00000459860 TMEM134Q9H6X4 195 aa23.94■■□□□ 1.42
SSNA1-202ENST00000459860 AAASQ9NRG9 546 aa23.94■■□□□ 1.42
SSNA1-202ENST00000459860 LMCD1Q9NZU5 365 aa23.94■■□□□ 1.42
SSNA1-202ENST00000459860 A0A1B0GUA9 196 aa23.93■■□□□ 1.42
SSNA1-202ENST00000459860 SLC16A4O15374 487 aa23.93■■□□□ 1.42
SSNA1-202ENST00000459860 STRN3Q13033 797 aa23.93■■□□□ 1.42
SSNA1-202ENST00000459860 GIT2Q14161 759 aa23.93■■□□□ 1.42
SSNA1-202ENST00000459860 LONRF3Q496Y0 759 aa23.93■■□□□ 1.42
SSNA1-202ENST00000459860 NAALADL2Q58DX5 795 aa23.93■■□□□ 1.42
SSNA1-202ENST00000459860 MYCT1Q8N699 235 aa23.93■■□□□ 1.42
SSNA1-202ENST00000459860 GDPD5Q8WTR4 605 aa23.93■■□□□ 1.42
SSNA1-202ENST00000459860 CLP1Q92989 425 aaKnown RBP23.93■■□□□ 1.42
SSNA1-202ENST00000459860 LPPQ93052 612 aa23.93■■□□□ 1.42
SSNA1-202ENST00000459860 DHX58Q96C10 678 aa23.93■■□□□ 1.42
SSNA1-202ENST00000459860 NTPCRQ9BSD7 190 aaKnown RBP23.93■■□□□ 1.42
SSNA1-202ENST00000459860 EIF2AQ9BY44 585 aaKnown RBP23.93■■□□□ 1.42
SSNA1-202ENST00000459860 UBN1Q9NPG3 1134 aa23.93■■□□□ 1.42
SSNA1-202ENST00000459860 ARHGAP28Q9P2N2 729 aa23.93■■□□□ 1.42
SSNA1-202ENST00000459860 A0A087X0B3 334 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 NPTXRO95502 500 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 RB1P06400 928 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 ITGA4P13612 1032 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 SCP2P22307 547 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 CLLU1OSQ5K130 101 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 RESP18Q5W5W9 173 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 DYMQ7RTS9 669 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 MRPL10Q7Z7H8 261 aaKnown RBP23.92■■□□□ 1.42
SSNA1-202ENST00000459860 URGCPQ8TCY9 931 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 HLA-CQ95604 372 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 CASD1Q96PB1 797 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 C11orf84Q9BUA3 381 aaPredicted RBP23.92■■□□□ 1.42
SSNA1-202ENST00000459860 MRPL4Q9BYD3 311 aaKnown RBP23.92■■□□□ 1.42
SSNA1-202ENST00000459860 RSAD1Q9HA92 442 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 RNF19AQ9NV58 838 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 IPPQ9Y573 584 aa23.92■■□□□ 1.42
SSNA1-202ENST00000459860 ABCD1P33897 745 aa23.91■■□□□ 1.42
SSNA1-202ENST00000459860 BMPR1AP36894 532 aa23.91■■□□□ 1.42
SSNA1-202ENST00000459860 ZNF131P52739 623 aa23.91■■□□□ 1.42
SSNA1-202ENST00000459860 ATF7IP2Q5U623 682 aa23.91■■□□□ 1.42
SSNA1-202ENST00000459860 CDR2LQ86X02 465 aaPredicted RBP23.91■■□□□ 1.42
SSNA1-202ENST00000459860 DDX12PQ92771 950 aa23.91■■□□□ 1.42
SSNA1-202ENST00000459860 PLVAPQ9BX97 442 aa23.91■■□□□ 1.42
SSNA1-202ENST00000459860 TNMDQ9H2S6 317 aa23.91■■□□□ 1.42
SSNA1-202ENST00000459860 PDZD7Q9H5P4 517 aa23.91■■□□□ 1.42
SSNA1-202ENST00000459860 MAGEF1Q9HAY2 307 aa23.91■■□□□ 1.42
SSNA1-202ENST00000459860 CIZ1Q9ULV3 898 aaPredicted RBP23.91■■□□□ 1.42
SSNA1-202ENST00000459860 INPP5FQ9Y2H2 1132 aa23.91■■□□□ 1.42
SSNA1-202ENST00000459860 PCDHB12Q9Y5F1 795 aa23.91■■□□□ 1.42
SSNA1-202ENST00000459860 K7ENM7 598 aa23.9■■□□□ 1.42
SSNA1-202ENST00000459860 LAG3P18627 525 aa23.9■■□□□ 1.42
SSNA1-202ENST00000459860 NCKAP1LP55160 1127 aa23.9■■□□□ 1.42
SSNA1-202ENST00000459860 AMPD3Q01432 767 aa23.9■■□□□ 1.42
SSNA1-202ENST00000459860 GPM6BQ13491 265 aa23.9■■□□□ 1.42
SSNA1-202ENST00000459860 DCAF4L1Q3SXM0 396 aa23.9■■□□□ 1.42
SSNA1-202ENST00000459860 ADALQ6DHV7 355 aa23.9■■□□□ 1.42
SSNA1-202ENST00000459860 FAM178BQ8IXR5 827 aa23.9■■□□□ 1.42
SSNA1-202ENST00000459860 TMEM161BQ8NDZ6 487 aa23.9■■□□□ 1.42
SSNA1-202ENST00000459860 CHAMP1Q96JM3 812 aa23.9■■□□□ 1.42
SSNA1-202ENST00000459860 APOL6Q9BWW8 343 aa23.9■■□□□ 1.42
SSNA1-202ENST00000459860 TYW1Q9NV66 732 aaKnown RBP23.9■■□□□ 1.42
SSNA1-202ENST00000459860 MYMKA6NI61 221 aa23.89■■□□□ 1.41
SSNA1-202ENST00000459860 C5orf67F2Z3F1 127 aa23.89■■□□□ 1.41
SSNA1-202ENST00000459860 POLR2DO15514 142 aaKnown RBP23.89■■□□□ 1.41
SSNA1-202ENST00000459860 TRAK2O60296 914 aa23.89■■□□□ 1.41
SSNA1-202ENST00000459860 RNASELQ05823 741 aaKnown RBP23.89■■□□□ 1.41
SSNA1-202ENST00000459860 E2F4Q16254 413 aa23.89■■□□□ 1.41
SSNA1-202ENST00000459860 CSPP1Q1MSJ5 1256 aa23.89■■□□□ 1.41
SSNA1-202ENST00000459860 NOMO2Q5JPE7 1267 aa23.89■■□□□ 1.41
SSNA1-202ENST00000459860 SMG8Q8ND04 991 aaKnown RBP23.89■■□□□ 1.41
SSNA1-202ENST00000459860 KCNH3Q9ULD8 1083 aa23.89■■□□□ 1.41
SSNA1-202ENST00000459860 TDRD15B5MCY1 1934 aaKnown RBP23.88■■□□□ 1.41
SSNA1-202ENST00000459860 H3BNC9 293 aa23.88■■□□□ 1.41
SSNA1-202ENST00000459860 MAPTP10636 758 aaKnown RBP23.88■■□□□ 1.41
SSNA1-202ENST00000459860 IDEP14735 1019 aa23.88■■□□□ 1.41
SSNA1-202ENST00000459860 GAP43P17677 238 aa23.88■■□□□ 1.41
SSNA1-202ENST00000459860 PTPROQ16827 1216 aa23.88■■□□□ 1.41
SSNA1-202ENST00000459860 AGMOQ6ZNB7 445 aa23.88■■□□□ 1.41
SSNA1-202ENST00000459860 HAUS6Q7Z4H7 955 aa23.88■■□□□ 1.41
SSNA1-202ENST00000459860 CEP57L1Q8IYX8 460 aa23.88■■□□□ 1.41
SSNA1-202ENST00000459860 P2RX5Q93086 422 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms