RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 LRRC43Q8N309 656 aa12.13□□□□□ -0.47
TRAPPC10-204ENST00000459741 PDP2Q9P2J9 529 aa12.13□□□□□ -0.47
TRAPPC10-204ENST00000459741 POTEB3A0JP26 581 aa12.13□□□□□ -0.47
TRAPPC10-204ENST00000459741 ENO4A6NNW6 628 aa12.13□□□□□ -0.47
TRAPPC10-204ENST00000459741 POTECB2RU33 542 aa12.13□□□□□ -0.47
TRAPPC10-204ENST00000459741 STK25O00506 426 aa12.13□□□□□ -0.47
TRAPPC10-204ENST00000459741 GCLMP48507 274 aa12.13□□□□□ -0.47
TRAPPC10-204ENST00000459741 POTEBQ6S5H4 581 aa12.13□□□□□ -0.47
TRAPPC10-204ENST00000459741 FAM160B2Q86V87 743 aa12.13□□□□□ -0.47
TRAPPC10-204ENST00000459741 RASSF3Q86WH2 238 aa12.13□□□□□ -0.47
TRAPPC10-204ENST00000459741 NLGN1Q8N2Q7 840 aa12.13□□□□□ -0.47
TRAPPC10-204ENST00000459741 CD248Q9HCU0 757 aa12.13□□□□□ -0.47
TRAPPC10-204ENST00000459741 ALKQ9UM73 1620 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 PPEF1O14829 653 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 EPHB1P54762 984 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 GALCP54803 685 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 THOC5Q13769 683 aaKnown RBP12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 CCNYQ8ND76 341 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 SLC38A10Q9HBR0 1119 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 UTYO14607 1347 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 CLRN2A0PK11 232 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 WDR64B1ANS9 1081 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 IGF2BP3O00425 579 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 TMEM253P0C7T8 217 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 CYFIP1Q7L576 1253 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 DCLK2Q8N568 766 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 MSL3Q8N5Y2 521 aaKnown RBP12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 OR2W6PQ8NHA6 318 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 PLA2G12BQ9BX93 195 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 SNX25Q9H3E2 840 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 TMBIM4Q9HC24 238 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 GHRP10912 638 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 TBXAS1P24557 533 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 NOP14P78316 857 aaKnown RBP12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 OR6B2Q6IFH4 312 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 ELMSAN1Q6PJG2 1045 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 ERP27Q96DN0 273 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 TAC1P20366 129 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 JAK3P52333 1124 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 TAP1Q03518 808 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 ERFEQ4G0M1 354 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 KLC3Q6P597 504 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 SRBD1Q8N5C6 995 aaKnown RBP12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 SLC35G2Q8TBE7 412 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 GIPC2Q8TF65 315 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 UBN1Q9NPG3 1134 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 DONSONQ9NYP3 566 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 FAM8A1Q9UBU6 413 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 SLC12A6Q9UHW9 1150 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 USP17L5A8MUK1 530 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 UCHL3P15374 230 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 SCTRP47872 440 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 SUPT20HL1Q3ZLR7 823 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 TRIM65Q6PJ69 517 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 SLC26A7Q8TE54 656 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 MTO1Q9Y2Z2 717 aaKnown RBP12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 SALL3Q9BXA9 1300 aa12.12□□□□□ -0.47
TRAPPC10-204ENST00000459741 TMEM120BA0PK00 339 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 GOLGA8IPA6NC78 632 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 GOLGA8JA6NMD2 632 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 BBOX1O75936 387 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 VHLP40337 213 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 AARSP49588 968 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 MYLK4Q86YV6 388 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 GANCQ8TET4 914 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 C1orf54Q8WWF1 131 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 SERPINB12Q96P63 405 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 GCNAQ96QF7 691 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 ATP6V0A4Q9HBG4 840 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 ASNSD1Q9NWL6 643 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 DLC1Q96QB1 1528 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 ASAP2O43150 1006 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 CYP2D6P10635 497 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 CASP2P42575 452 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 TEX2Q8IWB9 1127 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 DHX38Q92620 1227 aaKnown RBP12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 BTBD6Q96KE9 485 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 ZWILCHQ9H900 591 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 QTRT2Q9H974 415 aaKnown RBP12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 PI4KBQ9UBF8 816 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 CPSF3Q9UKF6 684 aaKnown RBP12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 ZHX2Q9Y6X8 837 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 O00370 1275 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 SLC4A1P02730 911 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 NQO1P15559 274 aaKnown RBP12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 USP49Q70CQ1 688 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 PSAPP07602 524 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 UBXN2AP68543 259 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 STK4Q13043 487 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 PPM1NQ8N819 430 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 CASKIN2Q8WXE0 1202 aa12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 PSMC3IPQ9P2W1 217 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC10-204ENST00000459741 SFI1A8K8P3 1242 aa12.1□□□□□ -0.47
TRAPPC10-204ENST00000459741 GSTA4O15217 222 aa12.1□□□□□ -0.47
TRAPPC10-204ENST00000459741 TFAMQ00059 246 aaKnown RBP12.1□□□□□ -0.47
TRAPPC10-204ENST00000459741 HIF1AQ16665 826 aa12.1□□□□□ -0.47
TRAPPC10-204ENST00000459741 SUSD4Q5VX71 490 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms