RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 TRPC3Q13507 836 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 SPA17Q15506 151 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 SNRNP35Q16560 246 aaKnown RBP6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 PTGISQ16647 500 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 EXOC3L4Q17RC7 722 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZNF568Q3ZCX4 644 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 NOTUMQ6P988 496 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 MPZL3Q6UWV2 235 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 CXCL17Q6UXB2 119 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 VSTM4Q8IW00 320 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 CD302Q8IX05 232 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 C12orf56Q8IXR9 622 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 OR8K1Q8NGG5 319 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 TMC2Q8TDI7 906 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 EEF2KMTQ96G04 330 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 ANKRD36BP1Q96IX9 119 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 DUSP9Q99956 384 aaKnown RBP6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 FAM213AQ9BRX8 229 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 EDEM3Q9BZQ6 932 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 KATNBL1Q9H079 304 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 RNF208Q9H0X6 261 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 UPF3AQ9H1J1 476 aaKnown RBP6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 RPF1Q9H9Y2 349 aaKnown RBP6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 PDLIM7Q9NR12 457 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 ARHGAP28Q9P2N2 729 aa6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.35□□□□□ -1.39
RNU1-88P-201ENST00000459274 A0A087WZ62 844 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 IGKV6-21A0A0C4DH24 114 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 GTPBP10A4D1E9 387 aaKnown RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 GOLGA6L9A6NEM1 432 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 DCDC2CA8MYV0 355 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 OGTO15294 1046 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 CAND2O75155 1236 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 STBD1O95210 358 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 VTNP04004 478 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 TMEM191BP0C7N4 346 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 DLATP10515 647 aaKnown RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 SKILP12757 684 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 P4HA1P13674 534 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 EIF4BP23588 611 aaKnown RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 CCND3P30281 292 aaPredicted RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 GTF2H1P32780 548 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 CYLC1P35663 651 aaPredicted RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 CTCFP49711 727 aaPredicted RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 GPC3P51654 580 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 CASP5P51878 434 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 ACLYP53396 1101 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 CRYBB1P53674 252 aaPredicted RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 PMS1P54277 932 aaKnown RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 MFAP3P55082 362 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 SOX10P56693 466 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 PTENP60484 403 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 YWHAEP62258 255 aaKnown RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 KRT83P78385 493 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 HTRA3P83110 453 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 MYL7Q01449 175 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 POU5F1Q01860 360 aaKnown RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 MAPK7Q13164 816 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 BFSP2Q13515 415 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 ITGA7Q13683 1181 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 CAPSQ13938 189 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 NOLC1Q14978 699 aaKnown RBP eCLIP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 NBPF20Q3BBV1 942 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 DCAF4L1Q3SXM0 396 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 KRT39Q6A163 491 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 CYP26C1Q6V0L0 522 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 CTU1Q7Z7A3 348 aaKnown RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZBTB33Q86T24 672 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 ZSCAN30Q86W11 494 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 TMTC1Q8IUR5 882 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 KSR1Q8IVT5 923 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 LRRC8AQ8IWT6 810 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 DAW1Q8N136 415 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 USP38Q8NB14 1042 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 ASAP3Q8TDY4 903 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 LRRC15Q8TF66 581 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 LMBR1Q8WVP7 490 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 TRAPPC12Q8WVT3 735 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 DNAJB3Q8WWF6 145 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 CCDC127Q96BQ5 260 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 PDLIM2Q96JY6 352 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 NAP1L5Q96NT1 182 aaPredicted RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 ACAP3Q96P50 834 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 PANX2Q96RD6 677 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 ERGIC2Q96RQ1 377 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 TSPAN18Q96SJ8 248 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 BAG1Q99933 345 aaPredicted RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 FDXACB1Q9BRP7 624 aaPredicted RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 XPNPEP1Q9NQW7 623 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 C1orf112Q9NSG2 853 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 RBAKQ9NYW8 714 aaPredicted RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 HDAC6Q9UBN7 1215 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 TNFSF13BQ9Y275 285 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 PTPN22Q9Y2R2 807 aa6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 BZW2Q9Y6E2 419 aaKnown RBP6.34□□□□□ -1.39
RNU1-88P-201ENST00000459274 GOLGA8IPA6NC78 632 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 GOLGA8JA6NMD2 632 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 HAS3O00219 553 aa6.33□□□□□ -1.4
RNU1-88P-201ENST00000459274 TGFB1I1O43294 461 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms