RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 SIGLEC16A6NMB1 481 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 CCDC169A6NNP5 214 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 KRT38O76015 456 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 GFPT2O94808 682 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 GOLGA8HP0CJ92 632 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 CHN1P15882 459 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 TRAPPC10P48553 1259 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 NEK2P51955 445 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 HDAC4P56524 1084 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 TNFAIP1Q13829 316 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 LIN52Q52LA3 116 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 USP17L2Q6R6M4 530 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 OLFML1Q6UWY5 402 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 C3orf62Q6ZUJ4 267 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 HEATR3Q7Z4Q2 680 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 PPFIBP2Q8ND30 876 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 NUDCD1Q96RS6 583 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 MYOZ2Q9NPC6 264 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 TIMMDC1Q9NPL8 285 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 INTS9Q9NV88 658 aaKnown RBP12.18□□□□□ -0.46
DDX39B-214ENST00000458640 BARHL2Q9NY43 387 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 TMEM59LQ9UK28 342 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 USP20Q9Y2K6 914 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 SRPRBQ9Y5M8 271 aaKnown RBP12.18□□□□□ -0.46
DDX39B-214ENST00000458640 RCCD1A6NED2 376 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 EYA4O95677 639 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 AGTP01019 485 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 NUDT17P0C025 328 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 PABPC4LP0CB38 370 aaKnown RBP12.18□□□□□ -0.46
DDX39B-214ENST00000458640 HOXD12P35452 270 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 NFRKBQ6P4R8 1299 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 DAGLBQ8NCG7 672 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 ZNF507Q8TCN5 953 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 OXER1Q8TDS5 423 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 DHTKD1Q96HY7 919 aaPredicted RBP12.18□□□□□ -0.46
DDX39B-214ENST00000458640 CCDC42Q96M95 316 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 NACA2Q9H009 215 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 VPS16Q9H269 839 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.18□□□□□ -0.46
DDX39B-214ENST00000458640 NKX1-2Q9UD57 310 aaPredicted RBP12.18□□□□□ -0.46
DDX39B-214ENST00000458640 FBXO2Q9UK22 296 aaPredicted RBP12.18□□□□□ -0.46
DDX39B-214ENST00000458640 INTUQ9ULD6 942 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 PCDHA4Q9UN74 947 aa12.18□□□□□ -0.46
DDX39B-214ENST00000458640 MYH7BA7E2Y1 1941 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 TRIM75PA6NK02 468 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 FAM196BA6NMK8 535 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 A8MUI8 341 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 USP17L5A8MUK1 530 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 SMAPO00193 183 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 CYTH3O43739 400 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 ZNF280AP59817 542 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-214ENST00000458640 HPCAP84074 193 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 ZNF543Q08ER8 600 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 CFAP157Q5JU67 520 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 BTNL9Q6UXG8 535 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 RSPH3Q86UC2 560 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 SLC15A3Q8IY34 581 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 BLIDQ8IZY5 108 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 DIS3LQ8TF46 1054 aaKnown RBP12.17□□□□□ -0.46
DDX39B-214ENST00000458640 ZBED3Q96IU2 234 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-214ENST00000458640 NOX5Q96PH1 765 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 TMEM109Q9BVC6 243 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 TLR10Q9BXR5 811 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 TTYH3Q9C0H2 523 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 RIOX1Q9H6W3 641 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 RHBDL2Q9NX52 303 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 AIPL1Q9NZN9 384 aa12.17□□□□□ -0.46
DDX39B-214ENST00000458640 SUCLA2Q9P2R7 463 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-214ENST00000458640 BAZ2BQ9UIF8 2168 aaKnown RBP12.17□□□□□ -0.46
DDX39B-214ENST00000458640 WNT10BO00744 389 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 TBC1D12O60347 775 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 UPP2O95045 317 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 CD44P16070 742 aaKnown RBP12.16□□□□□ -0.46
DDX39B-214ENST00000458640 PORP16435 677 aaPredicted RBP12.16□□□□□ -0.46
DDX39B-214ENST00000458640 GNA11P29992 359 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 CDC25AP30304 524 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 TRPC1P48995 793 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 PAK1Q13153 545 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 CYLC2Q14093 348 aaPredicted RBP12.16□□□□□ -0.46
DDX39B-214ENST00000458640 RCN2Q14257 317 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 HLTFQ14527 1009 aaKnown RBP eCLIP12.16□□□□□ -0.461e-9■□□□□ 10.3
DDX39B-214ENST00000458640 CCDC174Q6PII3 467 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 TAOK1Q7L7X3 1001 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 CLEC10AQ8IUN9 316 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 PHC3Q8NDX5 983 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 DCAF4Q8WV16 495 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 GPKOWQ92917 476 aaPredicted RBP eCLIP12.16□□□□□ -0.46
DDX39B-214ENST00000458640 IFIH1Q9BYX4 1025 aaKnown RBP12.16□□□□□ -0.46
DDX39B-214ENST00000458640 DPH5Q9H2P9 285 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 C6orf50Q9HD87 102 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 PTTG2Q9NZH5 202 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 PRKAG3Q9UGI9 489 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 R3HDM2Q9Y2K5 976 aaKnown RBP12.16□□□□□ -0.46
DDX39B-214ENST00000458640 PCDHA13Q9Y5I0 950 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 NR2E3Q9Y5X4 410 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 DICER1Q9UPY3 1922 aaKnown RBP12.16□□□□□ -0.46
DDX39B-214ENST00000458640 FRMPD2Q68DX3 1309 aaPredicted RBP12.16□□□□□ -0.46
DDX39B-214ENST00000458640 A0A0J9YVX5 310 aa12.16□□□□□ -0.46
DDX39B-214ENST00000458640 CCDC188H7C350 402 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms