RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 DAW1Q8N136 415 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 CNNM3Q8NE01 707 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 SYMPKQ92797 1274 aaKnown RBP20.6■□□□□ 0.89
USP39-209ENST00000458268 ENTPD7Q9NQZ7 604 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 CLDND1Q9NY35 253 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 SPG21Q9NZD8 308 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 KLK14Q9P0G3 267 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 CCDC39Q9UFE4 941 aa20.6■□□□□ 0.89
USP39-209ENST00000458268 K7ERI5 159 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 F13A1P00488 732 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 KCNA5P22460 613 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 AFF1P51825 1210 aaKnown RBP20.59■□□□□ 0.89
USP39-209ENST00000458268 MAPK7Q13164 816 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 PKP1Q13835 747 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 CSPP1Q1MSJ5 1256 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 PPP4R3CPQ6ZMV5 832 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 MRPL10Q7Z7H8 261 aaKnown RBP20.59■□□□□ 0.89
USP39-209ENST00000458268 LRRC15Q8TF66 581 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 PRIMPOLQ96LW4 560 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 ZFP42Q96MM3 310 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 GAD1Q99259 594 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 ADPGKQ9BRR6 497 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 PANK2Q9BZ23 570 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 CCDC113Q9H0I3 377 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 FZD8Q9H461 694 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 PDZD7Q9H5P4 517 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 NRDE2Q9H7Z3 1164 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 UBE2ZQ9H832 354 aaPredicted RBP20.59■□□□□ 0.89
USP39-209ENST00000458268 TLR9Q9NR96 1032 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 DNAJB4Q9UDY4 337 aa20.59■□□□□ 0.89
USP39-209ENST00000458268 PUF60Q9UHX1 559 aaKnown RBP20.59■□□□□ 0.89
USP39-209ENST00000458268 SRPRBQ9Y5M8 271 aaKnown RBP20.59■□□□□ 0.89
USP39-209ENST00000458268 PRUNE2Q8WUY3 3088 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 HARSP12081 509 aaKnown RBP20.58■□□□□ 0.89
USP39-209ENST00000458268 GUCY2CP25092 1073 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 GTF2F1P35269 517 aaKnown RBP eCLIP20.58■□□□□ 0.89
USP39-209ENST00000458268 PPM1AP35813 382 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 SCNN1GP51170 649 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 KCNQ1P51787 676 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 EFNA5P52803 228 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 KRT17Q04695 432 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 SLC39A14Q15043 492 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 EEF1DP3Q658K8 133 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 ADGRD2Q7Z7M1 963 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 ZNF280BQ86YH2 543 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 KRI1Q8N9T8 703 aaKnown RBP20.58■□□□□ 0.89
USP39-209ENST00000458268 LARP4BQ92615 738 aaKnown RBP20.58■□□□□ 0.89
USP39-209ENST00000458268 RAD54LQ92698 747 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 TMEM169Q96HH4 297 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 RPS6KC1Q96S38 1066 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 COG5Q9UP83 839 aa20.58■□□□□ 0.89
USP39-209ENST00000458268 PHLPP2Q6ZVD8 1323 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 A0A1B0GUA9 196 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 ACKR2O00590 384 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 FAM13AO94988 1023 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 NRIP1P48552 1158 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 ERVFC1P60507 584 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 CAMK1Q14012 370 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 TJAP1Q5JTD0 557 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 ATF7IP2Q5U623 682 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 RRAGBQ5VZM2 374 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 ATXN2LQ8WWM7 1075 aaKnown RBP20.57■□□□□ 0.88
USP39-209ENST00000458268 MRPS27Q92552 414 aaKnown RBP20.57■□□□□ 0.88
USP39-209ENST00000458268 PPP2R3CQ969Q6 453 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 ASB2Q96Q27 587 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 TCF25Q9BQ70 676 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 REEP2Q9BRK0 252 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 UBN1Q9NPG3 1134 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 BLOC1S4Q9NUP1 217 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 GDAQ9Y2T3 454 aa20.57■□□□□ 0.88
USP39-209ENST00000458268 PRG3Q9Y2Y8 225 aaPredicted RBP20.57■□□□□ 0.88
USP39-209ENST00000458268 BRWD1Q9NSI6 2320 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 ARL5CA6NH57 179 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 H3BQ06 376 aaPredicted RBP20.56■□□□□ 0.88
USP39-209ENST00000458268 DLL1O00548 723 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 SPTLC2O15270 562 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 SLC26A4O43511 780 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 B4GALT3O60512 393 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 TBCAO75347 108 aaKnown RBP20.56■□□□□ 0.88
USP39-209ENST00000458268 DDHD2O94830 711 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 MATR3P43243 847 aaKnown RBP eCLIP20.56■□□□□ 0.88
USP39-209ENST00000458268 OR1G1P47890 313 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 SLC11A1P49279 550 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 SMTNP53814 917 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 HYAL1Q12794 435 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 CLUL1Q15846 466 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 FAM187BQ17R55 369 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 AAK1Q2M2I8 961 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 NT5DC1Q5TFE4 455 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 TMC7Q7Z402 723 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 ZBTB33Q86T24 672 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 SLC39A11Q8N1S5 342 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 PDILTQ8N807 584 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 TIPINQ9BVW5 301 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 CCSER1Q9C0I3 900 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 SNTG2Q9NY99 539 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 REV3LO60673 3130 aa20.56■□□□□ 0.88
USP39-209ENST00000458268 PER2O15055 1255 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 LINC01565O15544 149 aa20.55■□□□□ 0.88
USP39-209ENST00000458268 PLS3P13797 630 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms