RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 PTPRZ1P23471 2315 aaPredicted RBP17.51■□□□□ 0.39
CHCHD3-204ENST00000457942 CWF19L1Q69YN2 538 aaKnown RBP17.51■□□□□ 0.39
CHCHD3-204ENST00000457942 VPS52Q8N1B4 723 aa17.51■□□□□ 0.39
CHCHD3-204ENST00000457942 FAM184AQ8NB25 1140 aa17.51■□□□□ 0.39
CHCHD3-204ENST00000457942 AUTS2Q8WXX7 1259 aa17.51■□□□□ 0.39
CHCHD3-204ENST00000457942 NRDE2Q9H7Z3 1164 aa17.51■□□□□ 0.39
CHCHD3-204ENST00000457942 XPNPEP1Q9NQW7 623 aa17.51■□□□□ 0.39
CHCHD3-204ENST00000457942 ANKEF1Q9NU02 776 aa17.51■□□□□ 0.39
CHCHD3-204ENST00000457942 DBR1Q9UK59 544 aaKnown RBP17.51■□□□□ 0.39
CHCHD3-204ENST00000457942 CNTNAP2Q9UHC6 1331 aa17.5■□□□□ 0.39
CHCHD3-204ENST00000457942 C2orf71A6NGG8 1288 aa17.5■□□□□ 0.39
CHCHD3-204ENST00000457942 USO1O60763 962 aaKnown RBP17.5■□□□□ 0.39
CHCHD3-204ENST00000457942 OFD1O75665 1012 aa17.5■□□□□ 0.39
CHCHD3-204ENST00000457942 LYPLA2O95372 231 aa17.5■□□□□ 0.39
CHCHD3-204ENST00000457942 CXCL14O95715 111 aa17.5■□□□□ 0.39
CHCHD3-204ENST00000457942 NUBP1P53384 320 aa17.5■□□□□ 0.39
CHCHD3-204ENST00000457942 TMEM173Q86WV6 379 aaPredicted RBP17.5■□□□□ 0.39
CHCHD3-204ENST00000457942 PIGOQ8TEQ8 1089 aa17.5■□□□□ 0.39
CHCHD3-204ENST00000457942 TRIM6Q9C030 488 aaPredicted RBP17.5■□□□□ 0.39
CHCHD3-204ENST00000457942 ADAM7Q9H2U9 754 aa17.5■□□□□ 0.39
CHCHD3-204ENST00000457942 RIF1Q5UIP0 2472 aaKnown RBP17.5■□□□□ 0.39
CHCHD3-204ENST00000457942 GVINP1Q7Z2Y8 2422 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 FRYLO94915 3013 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 SPDYE4A6NLX3 237 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 CLASP2O75122 1294 aaKnown RBP17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 GALTP07902 379 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 ITGA4P13612 1032 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 SLC11A1P49279 550 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 NOTUMQ6P988 496 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 AGMOQ6ZNB7 445 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 MAEAQ7L5Y9 396 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 MRPL43Q8N983 215 aaKnown RBP17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 ASAP3Q8TDY4 903 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 IGSF21Q96ID5 467 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 CPB2Q96IY4 423 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 NECTIN4Q96NY8 510 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 MTMR9Q96QG7 549 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 HSD17B14Q9BPX1 270 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 LLPHQ9BRT6 129 aaKnown RBP17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 APOL6Q9BWW8 343 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 ZBP1Q9H171 429 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 POLR3FQ9H1D9 316 aaPredicted RBP17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 TMEM60Q9H2L4 133 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 DNAJB4Q9UDY4 337 aa17.49■□□□□ 0.39
CHCHD3-204ENST00000457942 A0A087WWV3 80 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 PI15O43692 258 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 TSPAN1O60635 241 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 POMCP01189 267 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 EPCAMP16422 314 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 AXLP30530 894 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 HOXA11P31270 313 aaPredicted RBP17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 MTHFRP42898 656 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 RARRES1P49788 294 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 PTENP60484 403 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 ITIH3Q06033 890 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 CAPSQ13938 189 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 PCBP1Q15365 356 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 ZNF174Q15697 407 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 UBXN11Q5T124 520 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 ERMP1Q7Z2K6 904 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 DDX53Q86TM3 631 aaKnown RBP17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 ZNF280BQ86YH2 543 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 CNNM3Q8NE01 707 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 ERMNQ8TAM6 284 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 CCDC51Q96ER9 411 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 ZSCAN31Q96LW9 406 aaPredicted RBP17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 KANSL3Q9P2N6 904 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 FAM186AA6NE01 2351 aa17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 TDRD15B5MCY1 1934 aaKnown RBP17.48■□□□□ 0.39
CHCHD3-204ENST00000457942 LRRIQ4A6NIV6 560 aa17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 SSBP05455 408 aaKnown RBP eCLIP17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 OR52Z1P0C646 297 aa17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 NCLP19338 710 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 MBTD1Q05BQ5 628 aa17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 GIT2Q14161 759 aa17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 TMC5Q6UXY8 1006 aa17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 MRPL10Q7Z7H8 261 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 HACE1Q8IYU2 909 aa17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 BCL7CQ8WUZ0 217 aaPredicted RBP17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 EIF2AQ9BY44 585 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 TUFT1Q9NNX1 390 aa17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 UBN1Q9NPG3 1134 aa17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 SH2B1Q9NRF2 756 aaPredicted RBP17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 NOL7Q9UMY1 257 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 IPPQ9Y573 584 aa17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 ZNF292O60281 2723 aa17.47■□□□□ 0.39
CHCHD3-204ENST00000457942 DENND4AQ7Z401 1863 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 DDHD2O94830 711 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 CTSAP10619 480 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 GLRA2P23416 452 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 ARL2P36404 184 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 MLH1P40692 756 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 ANGPT1Q15389 498 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 TMEM132AQ24JP5 1023 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 TTC38Q5R3I4 469 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 KIAA1841Q6NSI8 718 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 SMG8Q8ND04 991 aaKnown RBP17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 KCNG4Q8TDN1 519 aa17.46■□□□□ 0.39
CHCHD3-204ENST00000457942 TMEM175Q9BSA9 504 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms