RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 HSPBP1Q9NZL4 362 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 ADGRA3Q8IWK6 1321 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 ZSWIM8A7E2V4 1837 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 A0A1W2PQJ5 194 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 ACKR2O00590 384 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 TOM1L1O75674 476 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 AFPP02771 609 aaKnown RBP9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 MYL3P08590 195 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 C6orf222P0C671 652 aaPredicted RBP9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 GTF2H1P32780 548 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 SOX10P56693 466 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 POU5F1Q01860 360 aaKnown RBP9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 CETN1Q12798 172 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 DSG2Q14126 1118 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 KYAT1Q16773 422 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 GNASQ5JWF2 1037 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 SMYD5Q6GMV2 418 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 NFRKBQ6P4R8 1299 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 CCDC186Q7Z3E2 898 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 APBB1IPQ7Z5R6 666 aaPredicted RBP9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 SRGAP1Q7Z6B7 1085 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 RNF180Q86T96 592 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 SESTD1Q86VW0 696 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 FMNL3Q8IVF7 1028 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 NME8Q8N427 588 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 RNF149Q8NC42 400 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 ZNF296Q8WUU4 475 aaPredicted RBP9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 PTCD2Q8WV60 388 aaKnown RBP9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 LMBR1Q8WVP7 490 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 BORCS6Q96GS4 357 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 PANX2Q96RD6 677 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 KIFC3Q9BVG8 833 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 INO80BQ9C086 356 aaPredicted RBP9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 NUCKS1Q9H1E3 243 aaKnown RBP9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 XPNPEP3Q9NQH7 507 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 DDX20Q9UHI6 824 aaKnown RBP9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 ZKSCAN5Q9Y2L8 839 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 SCN10AQ9Y5Y9 1956 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 KAT6AQ92794 2004 aa9.73□□□□□ -0.85
CDC42EP3-204ENST00000457889 C17orf102A2RUQ5 167 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 AKR1B15C9JRZ8 316 aaPredicted RBP9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 CLIC2O15247 247 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 TEX33O43247 280 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 EXTL3O43909 919 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 ADAMTS4O75173 837 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 PRKCBP05771 671 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 TRIM21P19474 475 aaKnown RBP9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 RFX1P22670 979 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 PTGS1P23219 599 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 CYP2J2P51589 502 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 CLCN3P51790 818 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 IGBP1P78318 339 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 ADAM17P78536 824 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 PTPN11Q06124 597 aaPredicted RBP9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 BFSP1Q12934 665 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 SNRNP35Q16560 246 aaKnown RBP9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 MARCH8Q5T0T0 291 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 TAS1R3Q7RTX0 852 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 RHPN2Q8IUC4 686 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 LRRC8AQ8IWT6 810 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 GPD1LQ8N335 351 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 LRRC71Q8N4P6 559 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 C7orf31Q8N865 590 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 KLHDC9Q8NEP7 349 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 ZNF397Q8NF99 534 aaPredicted RBP9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 POMGNT1Q8WZA1 660 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 SLC35C1Q96A29 364 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 EEF2KMTQ96G04 330 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 CBWD1Q9BRT8 395 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 TSEN34Q9BSV6 310 aaKnown RBP9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 FZD8Q9H461 694 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 PLCB1Q9NQ66 1216 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 FBXL5Q9UKA1 691 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 AKT3Q9Y243 479 aa9.72□□□□□ -0.85
CDC42EP3-204ENST00000457889 A0A0B4J269 797 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 MOXD2PA6NHM9 499 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 ZNF233A6NK53 670 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 MFAP3LO75121 409 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 GYPCP04921 128 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 SRGAP2CP0DJJ0 459 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 ELNP15502 786 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 MSNP26038 577 aaKnown RBP9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 ADSSP30520 456 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 GRK4P32298 578 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 VAMP7P51809 220 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 MBTD1Q05BQ5 628 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 MCL1Q07820 350 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 NCBP1Q09161 790 aaKnown RBP9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 KCNH2Q12809 1159 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 DRP2Q13474 957 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 PRPF4BQ13523 1007 aaKnown RBP9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 ARID5BQ14865 1188 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 SYCP1Q15431 976 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 SURF1Q15526 300 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 TSR1Q2NL82 804 aaKnown RBP9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 DCAF17Q5H9S7 520 aaPredicted RBP9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 SLC39A4Q6P5W5 647 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 GBP6Q6ZN66 633 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 TSHZ1Q6ZSZ6 1077 aa9.71□□□□□ -0.86
CDC42EP3-204ENST00000457889 FAM43BQ6ZT52 329 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms