RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 SLC17A8Q8NDX2 589 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 P2RX5Q93086 422 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 PYM1Q9BRP8 204 aaKnown RBP9.36□□□□□ -0.91
SP140-207ENST00000456542 ADPGKQ9BRR6 497 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 C11orf84Q9BUA3 381 aaPredicted RBP9.36□□□□□ -0.91
SP140-207ENST00000456542 EIF2AQ9BY44 585 aaKnown RBP9.36□□□□□ -0.91
SP140-207ENST00000456542 TRIM6Q9C030 488 aaPredicted RBP9.36□□□□□ -0.91
SP140-207ENST00000456542 LRRC27Q9C0I9 530 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 TNMDQ9H2S6 317 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 RSAD1Q9HA92 442 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 MAGEF1Q9HAY2 307 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 UBN1Q9NPG3 1134 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 FAM13BQ9NYF5 915 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 LMCD1Q9NZU5 365 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 MTUS1Q9ULD2 1270 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 CIZ1Q9ULV3 898 aaPredicted RBP9.36□□□□□ -0.91
SP140-207ENST00000456542 IPPQ9Y573 584 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 ATG2AQ2TAZ0 1938 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 PLXNA4Q9HCM2 1894 aa9.36□□□□□ -0.91
SP140-207ENST00000456542 CDH23Q9H251 3354 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 NPHP3-ACAD11A0A0J9YXS1 232 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 TTLL13PA6NNM8 815 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 INPPL1O15357 1258 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 GTPBP6O43824 516 aaPredicted RBP9.35□□□□□ -0.91
SP140-207ENST00000456542 TRAK2O60296 914 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 LPXNO60711 386 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 EDN1P05305 212 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 MAPTP10636 758 aaKnown RBP9.35□□□□□ -0.91
SP140-207ENST00000456542 ITGA4P13612 1032 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 LAG3P18627 525 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 CTNNB1P35222 781 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 CSPP1Q1MSJ5 1256 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 DCAF4L1Q3SXM0 396 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 ATF7IP2Q5U623 682 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 AGMOQ6ZNB7 445 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 TAS1R3Q7RTX0 852 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 HAUS6Q7Z4H7 955 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 APBB1IPQ7Z5R6 666 aaPredicted RBP9.35□□□□□ -0.91
SP140-207ENST00000456542 MYCT1Q8N699 235 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 TMEM161BQ8NDZ6 487 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 HELQQ8TDG4 1101 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 GDPD5Q8WTR4 605 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 DDX12PQ92771 950 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 LPPQ93052 612 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 DNAJC19Q96DA6 116 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 MRPL4Q9BYD3 311 aaKnown RBP9.35□□□□□ -0.91
SP140-207ENST00000456542 PANK2Q9BZ23 570 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 ST6GALNAC4Q9H4F1 302 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 PDZD7Q9H5P4 517 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 CWH43Q9H720 699 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 AAASQ9NRG9 546 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 TYW1Q9NV66 732 aaKnown RBP9.35□□□□□ -0.91
SP140-207ENST00000456542 KBTBD4Q9NVX7 518 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 KANSL3Q9P2N6 904 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 SEL1LQ9UBV2 794 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 TNFSF13BQ9Y275 285 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 MYO7AQ13402 2215 aa9.35□□□□□ -0.91
SP140-207ENST00000456542 FAM237AA0A1B0GTK4 181 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 A0A1W2PQ27 194 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 A0A1W2PQ64 194 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 A0A1W2PQD8 194 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 FRMD3A2A2Y4 597 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 MYMKA6NI61 221 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 MEIS3P2A8K0S8 358 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 K7ENM7 598 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 RFXAPO00287 272 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 OFD1O75665 1012 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 NPTXRO95502 500 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 GAP43P17677 238 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 LIG1P18858 919 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 CMA1P23946 247 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 PPM1AP35813 382 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 AMPD3Q01432 767 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 STRN3Q13033 797 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 GPM6BQ13491 265 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 TMEM132AQ24JP5 1023 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 NOMO2Q5JPE7 1267 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 NT5DC1Q5TFE4 455 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 EEF1DP3Q658K8 133 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 CNNM4Q6P4Q7 775 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 ZPBP2Q6X784 338 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 LRRC55Q6ZSA7 311 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 DYMQ7RTS9 669 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 CDR2LQ86X02 465 aaPredicted RBP9.34□□□□□ -0.91
SP140-207ENST00000456542 COLGALT1Q8NBJ5 622 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 URGCPQ8TCY9 931 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 DHX58Q96C10 678 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 CHAMP1Q96JM3 812 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 FIZ1Q96SL8 496 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 ACO2Q99798 780 aaKnown RBP9.34□□□□□ -0.91
SP140-207ENST00000456542 LMAN2LQ9H0V9 348 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 NXF3Q9H4D5 531 aaKnown RBP9.34□□□□□ -0.91
SP140-207ENST00000456542 PTPRHQ9HD43 1115 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 OLFML3Q9NRN5 406 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 TBC1D13Q9NVG8 400 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 GIT1Q9Y2X7 761 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 PCDHB12Q9Y5F1 795 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 MTCH2Q9Y6C9 303 aa9.34□□□□□ -0.91
SP140-207ENST00000456542 PDCD11Q14690 1871 aaKnown RBP9.34□□□□□ -0.91
SP140-207ENST00000456542 ABLIM1O14639 778 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms