RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 CCT8P50990 548 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 ZNF135P52742 658 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 MRPS15P82914 257 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 NCLNQ969V3 563 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 VPS50Q96JG6 964 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 NCOA5Q9HCD5 579 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 ADAM22Q9P0K1 906 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 KLHL8Q9P2G9 620 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 DCDC2Q9UHG0 476 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 BTBD18B2RXH4 712 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 O00370 1275 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 CASP2P42575 452 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 SGSM1Q2NKQ1 1148 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 FAM133BQ5BKY9 247 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 NUDCD3Q8IVD9 361 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 RDM1Q8NG50 284 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 MED15Q96RN5 788 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 UBE2TQ9NPD8 197 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 PLAAQ9Y263 795 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 E5RI56 91 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 PRR23D1E9PI22 279 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 TM9SF1O15321 606 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 PRR23D2P0DMB1 279 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 GARTP22102 1010 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 SDC4P31431 198 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 STAT3P40763 770 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 RGS4P49798 205 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 PRMT9Q6P2P2 845 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 GPT2Q8TD30 523 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 STARD8Q92502 1023 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 MAGEB10Q96LZ2 347 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 PSMB7Q99436 277 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 MKNK1Q9BUB5 465 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 PHACTR1Q9C0D0 580 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 COA1Q9GZY4 146 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 VTI1BQ9UEU0 232 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 PRKAG2Q9UGJ0 569 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 TRAF3IP3Q9Y228 551 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 RNF17Q9BXT8 1623 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 SRRM3A6NNA2 597 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 WDR47O94967 919 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 OCM2P0CE71 109 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 OCMP0CE72 109 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 MAPK1P28482 360 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 NUP62P37198 522 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 EIF4A3P38919 411 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 ATXN3P54252 364 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 SLC39A6Q13433 755 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 KRT24Q2M2I5 525 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 RMND5BQ96G75 393 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 MCCC1Q96RQ3 725 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 TGS1Q96RS0 853 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 GINS4Q9BRT9 223 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 CALN1Q9BXU9 219 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 PPARGC1AQ9UBK2 798 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 GRID1Q9ULK0 1009 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 UBAP1LF5GYI3 381 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 H0Y3Z8 333 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 CLDN3O15551 220 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 JAK2O60674 1132 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 IFNA14P01570 189 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 FGGP02679 453 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 HOXB8P17481 243 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 MAP4P27816 1152 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 IREB2P48200 963 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 ROR1Q01973 937 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 CTDSPL2Q05D32 466 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 CCDC144BQ3MJ40 725 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 SYDE2Q5VT97 1194 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 CC2D1AQ6P1N0 951 aaPredicted RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 TRMT44Q8IYL2 757 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 EIF1ADQ8N9N8 165 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 DACH2Q96NX9 599 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 FANCEQ9HB96 536 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 SMYD2Q9NRG4 433 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 RAD54BQ9Y620 910 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 IQCA1LA6NCM1 817 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 TRPA1O75762 1119 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 PHKG2P15735 406 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 HK2P52789 917 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 HIF1AQ16665 826 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 EDRF1Q3B7T1 1238 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 NLRP14Q86W24 1093 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 PPHLN1Q8NEY8 458 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 PPP2R3CQ969Q6 453 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 MRPL4Q9BYD3 311 aaKnown RBP4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 TRIM8Q9BZR9 551 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 CDC42BPBQ9Y5S2 1711 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 KATNA1O75449 491 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 RALAP11233 206 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 MYL6P60660 151 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 PTK6Q13882 451 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 KCTD16Q68DU8 428 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 KIAA1841Q6NSI8 718 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 BTNL9Q6UXG8 535 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 MICALL2Q8IY33 904 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 SERPINB12Q96P63 405 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 BRD8Q9H0E9 1235 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 STK39Q9UEW8 545 aa4.25□□□□□ -1.73
PPP1R9A-208ENST00000456331 DNAJC12Q9UKB3 198 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 245.4 ms