RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 USP49Q70CQ1 688 aa13.09□□□□□ -0.31
TMEM56-202ENST00000455656 CABP7Q86V35 215 aa13.09□□□□□ -0.31
TMEM56-202ENST00000455656 ZBTB8OSQ8IWT0 167 aa13.09□□□□□ -0.31
TMEM56-202ENST00000455656 VN1R2Q8NFZ6 395 aa13.09□□□□□ -0.31
TMEM56-202ENST00000455656 KIFAP3Q92845 792 aa13.09□□□□□ -0.31
TMEM56-202ENST00000455656 ZFP42Q96MM3 310 aa13.09□□□□□ -0.31
TMEM56-202ENST00000455656 NECAB3Q96P71 396 aaPredicted RBP13.09□□□□□ -0.31
TMEM56-202ENST00000455656 PLIN2Q99541 437 aa13.09□□□□□ -0.31
TMEM56-202ENST00000455656 NT5C3AQ9H0P0 336 aa13.09□□□□□ -0.31
TMEM56-202ENST00000455656 C2orf40Q9H1Z8 148 aa13.09□□□□□ -0.31
TMEM56-202ENST00000455656 CXCL16Q9H2A7 254 aa13.09□□□□□ -0.31
TMEM56-202ENST00000455656 SPG21Q9NZD8 308 aa13.09□□□□□ -0.31
TMEM56-202ENST00000455656 ARHGAP28Q9P2N2 729 aa13.09□□□□□ -0.31
TMEM56-202ENST00000455656 FBXO2Q9UK22 296 aaPredicted RBP13.09□□□□□ -0.31
TMEM56-202ENST00000455656 MORC2Q9Y6X9 1032 aaPredicted RBP13.09□□□□□ -0.31
TMEM56-202ENST00000455656 ZMYM2Q9UBW7 1377 aa13.08□□□□□ -0.31
TMEM56-202ENST00000455656 ARL5CA6NH57 179 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 H3BQ06 376 aaPredicted RBP13.08□□□□□ -0.32
TMEM56-202ENST00000455656 ACKR2O00590 384 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 SLC26A4O43511 780 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 STX6O43752 255 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 ZC3H11AO75152 810 aaKnown RBP eCLIP13.08□□□□□ -0.32
TMEM56-202ENST00000455656 EFEMP2O95967 443 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 POMCP01189 267 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 PRKCBP05771 671 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 LONP1P36776 959 aaKnown RBP13.08□□□□□ -0.32
TMEM56-202ENST00000455656 MLH1P40692 756 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 NPTX2P47972 431 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 DSC1Q08554 894 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 PPP2R5AQ15172 486 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 MAPK6Q16659 721 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 NT5DC1Q5TFE4 455 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 COLGALT2Q8IYK4 626 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 EFHBQ8N7U6 833 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 DEPTORQ8TB45 409 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 IGSF21Q96ID5 467 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 MSLNLQ96KJ4 702 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 USP28Q96RU2 1077 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 GAD1Q99259 594 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 CLDND1Q9NY35 253 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 CLEC1BQ9P126 229 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 GIT1Q9Y2X7 761 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 CUL9Q8IWT3 2517 aa13.08□□□□□ -0.32
TMEM56-202ENST00000455656 CITO14578 2027 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 HIDE1A8MVS5 230 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 ABLIM1O14639 778 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 PLA2G4BP0C869 781 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 IL9P15248 144 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 AKAP5P24588 427 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 NRIP1P48552 1158 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 SCNN1GP51170 649 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 PEX3P56589 373 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 RBM10P98175 930 aaKnown RBP13.07□□□□□ -0.32
TMEM56-202ENST00000455656 PRPF4BQ13523 1007 aaKnown RBP13.07□□□□□ -0.32
TMEM56-202ENST00000455656 ZRSR1Q15695 479 aaKnown RBP13.07□□□□□ -0.32
TMEM56-202ENST00000455656 DUSP6Q16828 381 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 PLPP4Q5VZY2 271 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 PDE12Q6L8Q7 609 aaKnown RBP13.07□□□□□ -0.32
TMEM56-202ENST00000455656 RNF168Q8IYW5 571 aaPredicted RBP13.07□□□□□ -0.32
TMEM56-202ENST00000455656 IFT74Q96LB3 600 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 UHRF1Q96T88 793 aaPredicted RBP13.07□□□□□ -0.32
TMEM56-202ENST00000455656 TCF25Q9BQ70 676 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 NTPCRQ9BSD7 190 aaKnown RBP13.07□□□□□ -0.32
TMEM56-202ENST00000455656 CCSER1Q9C0I3 900 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 ZBP1Q9H171 429 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 IGFLR1Q9H665 355 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 UBN1Q9NPG3 1134 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 MARCH5Q9NX47 278 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 PLXNA3P51805 1871 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 TTC28Q96AY4 2481 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 PHLPP2Q6ZVD8 1323 aa13.07□□□□□ -0.32
TMEM56-202ENST00000455656 C5orf42Q9H799 3197 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 VWA8A3KMH1 1905 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 NPHP3-ACAD11A0A0J9YXS1 232 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 GRXCR2A6NFK2 248 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 SFI1A8K8P3 1242 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 PTGESO14684 152 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 NRP1O14786 923 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 N4BP3O15049 544 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 PER2O15055 1255 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 NCK2O43639 380 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 PLCG1P19174 1290 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 MARCKSP29966 332 aaPredicted RBP13.06□□□□□ -0.32
TMEM56-202ENST00000455656 ALDH7A1P49419 539 aaKnown RBP13.06□□□□□ -0.32
TMEM56-202ENST00000455656 EFNA5P52803 228 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
TMEM56-202ENST00000455656 NCBP1Q09161 790 aaKnown RBP13.06□□□□□ -0.32
TMEM56-202ENST00000455656 RAD51AP2Q09MP3 1159 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 KARSQ15046 597 aaKnown RBP13.06□□□□□ -0.32
TMEM56-202ENST00000455656 SPECC1Q5M775 1068 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 RBM23Q86U06 439 aaKnown RBP13.06□□□□□ -0.32
TMEM56-202ENST00000455656 URGCPQ8TCY9 931 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 EPSTI1Q96J88 318 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 DRC1Q96MC2 740 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 CLIC6Q96NY7 704 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 TMEM175Q9BSA9 504 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 TIPINQ9BVW5 301 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 APOL6Q9BWW8 343 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 GBP3Q9H0R5 595 aa13.06□□□□□ -0.32
TMEM56-202ENST00000455656 ZSCAN16Q9H4T2 348 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms