RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 NHLH1Q02575 133 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 ADCY1Q08828 1119 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 MPP3Q13368 585 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 TP53BP2Q13625 1128 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 ZNF174Q15697 407 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 KIAA1841Q6NSI8 718 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 TIGD7Q6NT04 549 aaPredicted RBP3.42□□□□□ -1.86
LINC02540-201ENST00000455554 SPATA31D4Q6ZUB0 917 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 GPRIN1Q7Z2K8 1008 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 DDX53Q86TM3 631 aaKnown RBP3.42□□□□□ -1.86
LINC02540-201ENST00000455554 XYLT1Q86Y38 959 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 C7orf31Q8N865 590 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 CHST14Q8NCH0 376 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 PPP1R14CQ8TAE6 165 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 ASB10Q8WXI3 467 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 ANKS1AQ92625 1134 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 ADAM2Q99965 735 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 DUSP26Q9BV47 211 aa3.42□□□□□ -1.86
LINC02540-201ENST00000455554 MRPL4Q9BYD3 311 aaKnown RBP3.42□□□□□ -1.86
LINC02540-201ENST00000455554 USP36Q9P275 1121 aaKnown RBP3.42□□□□□ -1.86
LINC02540-201ENST00000455554 DNAJC9-AS1A6NH13 148 aa3.41□□□□□ -1.86
LINC02540-201ENST00000455554 RBMXL2O75526 392 aaKnown RBP3.41□□□□□ -1.86
LINC02540-201ENST00000455554 STK10O94804 968 aaKnown RBP3.41□□□□□ -1.86
LINC02540-201ENST00000455554 PRPF6O94906 941 aaKnown RBP3.41□□□□□ -1.86
LINC02540-201ENST00000455554 APOL3O95236 402 aa3.41□□□□□ -1.86
LINC02540-201ENST00000455554 EGR2P11161 476 aaPredicted RBP3.41□□□□□ -1.86
LINC02540-201ENST00000455554 PDCD4Q53EL6 469 aaKnown RBP3.41□□□□□ -1.86
LINC02540-201ENST00000455554 UNQ6494/PRO21346Q6UXR6 183 aa3.41□□□□□ -1.86
LINC02540-201ENST00000455554 PHYKPLQ8IUZ5 450 aa3.41□□□□□ -1.86
LINC02540-201ENST00000455554 SYT12Q8IV01 421 aa3.41□□□□□ -1.86
LINC02540-201ENST00000455554 SLC44A3Q8N4M1 653 aa3.41□□□□□ -1.86
LINC02540-201ENST00000455554 MYL10Q9BUA6 226 aa3.41□□□□□ -1.86
LINC02540-201ENST00000455554 SPON1Q9HCB6 807 aa3.41□□□□□ -1.86
LINC02540-201ENST00000455554 INTS7Q9NVH2 962 aaKnown RBP3.41□□□□□ -1.86
LINC02540-201ENST00000455554 SALL3Q9BXA9 1300 aa3.41□□□□□ -1.86
LINC02540-201ENST00000455554 PTPDC1A2A3K4 754 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 MARCH11A6NNE9 402 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 GLRX3O76003 335 aaKnown RBP3.4□□□□□ -1.87
LINC02540-201ENST00000455554 SPDEFO95238 335 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 MATN4O95460 622 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 LY86O95711 162 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 ITGAMP11215 1152 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 ABCG1P45844 678 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 MXRA7P84157 204 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 DUSP2Q05923 314 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 CD69Q07108 199 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 MAPK7Q13164 816 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 ESRP1Q6NXG1 681 aaKnown RBP3.4□□□□□ -1.87
LINC02540-201ENST00000455554 ZCCHC8Q6NZY4 707 aaKnown RBP3.4□□□□□ -1.87
LINC02540-201ENST00000455554 DRICH1Q6PGQ1 229 aaPredicted RBP3.4□□□□□ -1.87
LINC02540-201ENST00000455554 BTNL9Q6UXG8 535 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 OR10H5Q8NGA6 315 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 ZNF384Q8TF68 577 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 SLC29A3Q9BZD2 475 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 POFUT1Q9H488 388 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 KIAA1586Q9HCI6 787 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 TRIM39Q9HCM9 518 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 RNF181Q9P0P0 153 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 SAMD15Q9P1V8 674 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 MAST3O60307 1309 aa3.4□□□□□ -1.87
LINC02540-201ENST00000455554 CCDC163A0A0D9SF12 145 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 B4E1Z4 1266 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 RBP3P10745 1247 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 MGAT1P26572 445 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 RESTQ13127 1097 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 ARMC6Q6NXE6 501 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 TAS1R1Q7RTX1 841 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 C9orf106Q8NAJ2 232 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 CABP5Q9NP86 173 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 SEMA4GQ9NTN9 838 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 SIRPGQ9P1W8 387 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 MAP3K2Q9Y2U5 619 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 PCDHB6Q9Y5E3 794 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 FPGT-TNNI3KV9GXZ4 949 aa3.39□□□□□ -1.87
LINC02540-201ENST00000455554 IKBKBO14920 756 aa3.38□□□□□ -1.87
LINC02540-201ENST00000455554 PCDH8O95206 1070 aa3.38□□□□□ -1.87
LINC02540-201ENST00000455554 SLC9A1P19634 815 aa3.38□□□□□ -1.87
LINC02540-201ENST00000455554 FDXRP22570 491 aa3.38□□□□□ -1.87
LINC02540-201ENST00000455554 SIM1P81133 766 aaPredicted RBP3.38□□□□□ -1.87
LINC02540-201ENST00000455554 ZNF169Q14929 603 aaPredicted RBP3.38□□□□□ -1.87
LINC02540-201ENST00000455554 EFCAB12Q6NXP0 572 aa3.38□□□□□ -1.87
LINC02540-201ENST00000455554 C1QL2Q7Z5L3 287 aa3.38□□□□□ -1.87
LINC02540-201ENST00000455554 ARHGEF25Q86VW2 580 aa3.38□□□□□ -1.87
LINC02540-201ENST00000455554 ZNF366Q8N895 744 aa3.38□□□□□ -1.87
LINC02540-201ENST00000455554 CDYL2Q8N8U2 506 aa3.38□□□□□ -1.87
LINC02540-201ENST00000455554 ELF4Q99607 663 aaPredicted RBP3.38□□□□□ -1.87
LINC02540-201ENST00000455554 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.38□□□□□ -1.87
LINC02540-201ENST00000455554 POGKQ9P215 609 aa3.38□□□□□ -1.87
LINC02540-201ENST00000455554 B5MCH6 92 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 MGST3O14880 152 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 C1QL1O75973 258 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 CDKL5O76039 1030 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 SEC24DO94855 1032 aaPredicted RBP3.37□□□□□ -1.87
LINC02540-201ENST00000455554 FOSP01100 380 aaPredicted RBP3.37□□□□□ -1.87
LINC02540-201ENST00000455554 IGFALSP35858 605 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 ZNF81P51508 661 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 KRTAP10-6P60371 365 aaPredicted RBP3.37□□□□□ -1.87
LINC02540-201ENST00000455554 APBA1Q02410 837 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 PIK3R6Q5UE93 754 aa3.37□□□□□ -1.87
LINC02540-201ENST00000455554 ZZZ3Q8IYH5 903 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms