RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 IQCA1LA6NCM1 817 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 ATP4AP20648 1035 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 TAS1R2Q8TE23 839 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 SLC20A1Q8WUM9 679 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 NT5C1BQ96P26 610 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 C17orf75Q9HAS0 396 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 GSTTP1A0A1W2PQM5 241 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 H0YCG3 227 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 CYP26A1O43174 497 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 CEP104O60308 925 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 JAM2P57087 298 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 HSDL1Q3SXM5 330 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 MSTO1Q9BUK6 570 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 TLR10Q9BXR5 811 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 PORCNQ9H237 461 aa14.78□□□□□ -0.04
CLK3-203ENST00000454830 CHORDC1Q9UHD1 332 aaPredicted RBP14.78□□□□□ -0.04
CLK3-203ENST00000454830 MYH9P35579 1960 aaKnown RBP14.77□□□□□ -0.04
CLK3-203ENST00000454830 RBAK-RBAKDNI3L0D1 243 aa14.77□□□□□ -0.04
CLK3-203ENST00000454830 SLC7A5Q01650 507 aa14.77□□□□□ -0.04
CLK3-203ENST00000454830 BRD3Q15059 726 aa14.77□□□□□ -0.04
CLK3-203ENST00000454830 GJC2Q5T442 439 aaPredicted RBP14.77□□□□□ -0.04
CLK3-203ENST00000454830 PARD3BQ8TEW8 1205 aa14.77□□□□□ -0.04
CLK3-203ENST00000454830 TRAPPC12Q8WVT3 735 aa14.77□□□□□ -0.04
CLK3-203ENST00000454830 AGO2Q9UKV8 859 aaKnown RBP14.77□□□□□ -0.04
CLK3-203ENST00000454830 CCDC151A5D8V7 595 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 GLTPD2A6NH11 291 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 LRRIQ3A6PVS8 624 aaPredicted RBP14.77□□□□□ -0.05
CLK3-203ENST00000454830 ARIH2O95376 493 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 GLRA2P23416 452 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 PRKCIP41743 596 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 TUBB4BP68371 445 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 CFAP221Q4G0U5 840 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 C10orf76Q5T2E6 689 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 METTL7BQ6UX53 244 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 NLRP4Q96MN2 994 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 ST6GALNAC4Q9H4F1 302 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 ERVK-9P63128 1117 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 BRDTQ58F21 947 aaPredicted RBP14.77□□□□□ -0.05
CLK3-203ENST00000454830 DPY19L2P1Q6NXN4 242 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 GSPT2Q8IYD1 628 aaKnown RBP14.77□□□□□ -0.05
CLK3-203ENST00000454830 RPUSD2Q8IZ73 545 aaKnown RBP14.77□□□□□ -0.05
CLK3-203ENST00000454830 FBXL13Q8NEE6 735 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 LNX1Q8TBB1 728 aaPredicted RBP14.77□□□□□ -0.05
CLK3-203ENST00000454830 ZC3H15Q8WU90 426 aaKnown RBP14.77□□□□□ -0.05
CLK3-203ENST00000454830 PDE11AQ9HCR9 933 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 PDGFCQ9NRA1 345 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 CTTNBP2NLQ9P2B4 639 aa14.77□□□□□ -0.05
CLK3-203ENST00000454830 STBD1O95210 358 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 ICAM3P32942 547 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 MFAP3P55082 362 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 DRP2Q13474 957 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 SLC39A4Q6P5W5 647 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 HVCN1Q96D96 273 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 RPGRIP1Q96KN7 1286 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 ST7Q9NRC1 585 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 FBXL5Q9UKA1 691 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 CCL15-CCL14A0A0B4J2E2 113 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 GRID2IPA4D2P6 1211 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 OSTNP61366 133 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 CCL15Q16663 113 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 WDR44Q5JSH3 913 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 SV2AQ7L0J3 742 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 LMBR1Q8WVP7 490 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 PRPF31Q8WWY3 499 aaKnown RBP14.76□□□□□ -0.05
CLK3-203ENST00000454830 SCLT1Q96NL6 688 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 TSKSQ9UJT2 592 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 PNMA3Q9UL41 463 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 MAFBQ9Y5Q3 323 aaPredicted RBP14.76□□□□□ -0.05
CLK3-203ENST00000454830 FAM193AP78312 1265 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 CYP24A1Q07973 514 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 CDR2LQ86X02 465 aaPredicted RBP14.76□□□□□ -0.05
CLK3-203ENST00000454830 RHPN2Q8IUC4 686 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 CREG2Q8IUH2 290 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 FMNL3Q8IVF7 1028 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 KLHL7Q8IXQ5 586 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 C12orf56Q8IXR9 622 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 RNF149Q8NC42 400 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 SPATA4Q8NEY3 305 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 DHX38Q92620 1227 aaKnown RBP14.76□□□□□ -0.05
CLK3-203ENST00000454830 SEMA4DQ92854 862 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 ZBTB10Q96DT7 871 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 AGPAT1Q99943 283 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 OSGEPQ9NPF4 335 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 C1orf112Q9NSG2 853 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 TAS2R14Q9NYV8 317 aa14.76□□□□□ -0.05
CLK3-203ENST00000454830 INO80B-WBP1J3KQ70 363 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 CNMDO75829 334 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 PIK3CAP42336 1068 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 TMEM63BQ5T3F8 832 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 PALB2Q86YC2 1186 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 INO80BQ9C086 356 aaPredicted RBP14.75□□□□□ -0.05
CLK3-203ENST00000454830 RAB20Q9NX57 234 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 SGPL1O95470 568 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 CALCAP01258 141 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 NLRP11P59045 1033 aaKnown RBP14.75□□□□□ -0.05
CLK3-203ENST00000454830 SNRPFP62306 86 aaKnown RBP14.75□□□□□ -0.05
CLK3-203ENST00000454830 C8orf74Q6P047 294 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 TATDN2Q93075 761 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 CCDC102AQ96A19 550 aa14.75□□□□□ -0.05
CLK3-203ENST00000454830 TMEM8AQ9HCN3 771 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms