RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 KLK14Q9P0G3 267 aa6.71□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PCDHA4Q9UN74 947 aa6.71□□□□□ -1.34
HLA-DPA3-207ENST00000454398 USP20Q9Y2K6 914 aa6.71□□□□□ -1.34
HLA-DPA3-207ENST00000454398 IPPQ9Y573 584 aa6.71□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PATJQ8NI35 1801 aa6.71□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CCDC196A0A1B0GTZ2 297 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ARL5CA6NH57 179 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 M0R2N6 131 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 WNT7AO00755 349 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NRG2O14511 850 aaPredicted RBP6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MAFO75444 373 aaPredicted RBP6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ERLIN2O94905 339 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GLUD1P00367 558 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GLULP15104 373 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 IFNAR1P17181 557 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 AKAP5P24588 427 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 HSPA4P34932 840 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GLUD2P49448 558 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 DNM2P50570 870 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 RAB27AP51159 221 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TDGQ13569 410 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CTTNQ14247 550 aaKnown RBP6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PRSS55Q6UWB4 352 aaPredicted RBP6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 OTOP3Q7RTS5 596 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 KIAA2013Q8IYS2 634 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 BLIDQ8IZY5 108 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GPR152Q8TDT2 470 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PSPC1Q8WXF1 523 aaKnown RBP6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SLC7A3Q8WY07 619 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 KCNB2Q92953 911 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ACSF2Q96CM8 615 aaPredicted RBP6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 RMDN1Q96DB5 314 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CEP170P1Q96L14 293 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 RPP25Q9BUL9 199 aaKnown RBP6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 HERC2P3Q9BVR0 1158 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 EMILIN2Q9BXX0 1053 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NIFKQ9BYG3 293 aaKnown RBP6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SLKQ9H2G2 1235 aaPredicted RBP6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GPRC5CQ9NQ84 441 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 XPNPEP1Q9NQW7 623 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ARHGEF3Q9NR81 526 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MRPL17Q9NRX2 175 aaKnown RBP6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MIOSQ9NXC5 875 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 USTQ9Y2C2 406 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 IRAK3Q9Y616 596 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NUMBLQ9Y6R0 609 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 FANCMQ8IYD8 2048 aa6.7□□□□□ -1.34
HLA-DPA3-207ENST00000454398 F5P12259 2224 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NOTCH4Q99466 2003 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CCDC195A0A1B0GUA6 201 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CASTOR2A6NHX0 329 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TTLL13PA6NNM8 815 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 INO80B-WBP1J3KQ70 363 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ADAM12O43184 909 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TGM5O43548 720 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NPTXRO95502 500 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SOD2P04179 222 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 HMGB1P09429 215 aaKnown RBP6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 YWHABP31946 246 aaKnown RBP6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ID4P47928 161 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CLCN5P51795 746 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PSMC5P62195 406 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NR5A1Q13285 461 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 HTR4Q13639 388 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CAPSQ13938 189 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 BMS1Q14692 1282 aaKnown RBP6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 NONOQ15233 471 aaKnown RBP eCLIP6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TSGA10IPQ3SY00 556 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 Q4G0T1 1027 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 XKR9Q5GH70 373 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 RTP2Q5QGT7 225 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 FUT10Q6P4F1 479 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 PIK3AP1Q6ZUJ8 805 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MAEAQ7L5Y9 396 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TEX2Q8IWB9 1127 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 COLGALT2Q8IYK4 626 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TRIM22Q8IYM9 498 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 RNF168Q8IYW5 571 aaPredicted RBP6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 DCLK2Q8N568 766 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 ING5Q8WYH8 240 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 HAS1Q92839 578 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 DYDC2Q96IM9 177 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 MBOAT7Q96N66 472 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 FAM193BQ96PV7 902 aaPredicted RBP6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 RPS6KC1Q96S38 1066 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 KXD1Q9BQD3 176 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 TRAIPQ9BWF2 469 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 GPR62Q9BZJ7 368 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 INO80BQ9C086 356 aaPredicted RBP6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 DHX33Q9H6R0 707 aaKnown RBP6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 KCNMB3Q9NPA1 279 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CHST12Q9NRB3 414 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 FAN1Q9Y2M0 1017 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CACNA1GO43497 2377 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 USP24Q9UPU5 2620 aa6.69□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CEP295Q9C0D2 2601 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CFAP47Q6ZTR5 3102 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CYP3A7-CYP3A51PA0A087WV96 503 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 SHISA7A6NL88 538 aa6.68□□□□□ -1.34
HLA-DPA3-207ENST00000454398 CPLX1O14810 134 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms