RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 DYDC2Q96IM9 177 aa26.46■■□□□ 1.83
LYSMD2-202ENST00000454181 FBXL21Q9UKT6 434 aa26.46■■□□□ 1.83
LYSMD2-202ENST00000454181 LILRB3O75022 631 aa26.45■■□□□ 1.82
LYSMD2-202ENST00000454181 CYP4A11Q02928 519 aa26.45■■□□□ 1.82
LYSMD2-202ENST00000454181 CTTNQ14247 550 aaKnown RBP26.45■■□□□ 1.82
LYSMD2-202ENST00000454181 NOTUMQ6P988 496 aa26.45■■□□□ 1.82
LYSMD2-202ENST00000454181 HACE1Q8IYU2 909 aa26.45■■□□□ 1.82
LYSMD2-202ENST00000454181 HAS1Q92839 578 aa26.45■■□□□ 1.82
LYSMD2-202ENST00000454181 CCDC51Q96ER9 411 aa26.45■■□□□ 1.82
LYSMD2-202ENST00000454181 RPS6KC1Q96S38 1066 aa26.45■■□□□ 1.82
LYSMD2-202ENST00000454181 TRIM6Q9C030 488 aaPredicted RBP26.45■■□□□ 1.82
LYSMD2-202ENST00000454181 IPPQ9Y573 584 aa26.45■■□□□ 1.82
LYSMD2-202ENST00000454181 INO80B-WBP1J3KQ70 363 aa26.44■■□□□ 1.82
LYSMD2-202ENST00000454181 SCRN1Q12765 414 aa26.44■■□□□ 1.82
LYSMD2-202ENST00000454181 POTEDQ86YR6 584 aa26.44■■□□□ 1.82
LYSMD2-202ENST00000454181 CCDC43Q96MW1 224 aaKnown RBP26.44■■□□□ 1.82
LYSMD2-202ENST00000454181 GAD1Q99259 594 aa26.44■■□□□ 1.82
LYSMD2-202ENST00000454181 HERC2P3Q9BVR0 1158 aa26.44■■□□□ 1.82
LYSMD2-202ENST00000454181 MAN1C1Q9NR34 630 aa26.44■■□□□ 1.82
LYSMD2-202ENST00000454181 STK36Q9NRP7 1315 aa26.43■■□□□ 1.82
LYSMD2-202ENST00000454181 PROB1E7EW31 1015 aa26.43■■□□□ 1.82
LYSMD2-202ENST00000454181 GLUD2P49448 558 aa26.43■■□□□ 1.82
LYSMD2-202ENST00000454181 COLGALT2Q8IYK4 626 aa26.43■■□□□ 1.82
LYSMD2-202ENST00000454181 SMG8Q8ND04 991 aaKnown RBP26.43■■□□□ 1.82
LYSMD2-202ENST00000454181 WASF1Q92558 559 aa26.43■■□□□ 1.82
LYSMD2-202ENST00000454181 STAMQ92783 540 aa26.43■■□□□ 1.82
LYSMD2-202ENST00000454181 COLEC11Q9BWP8 271 aa26.43■■□□□ 1.82
LYSMD2-202ENST00000454181 KCNK12Q9HB15 430 aa26.43■■□□□ 1.82
LYSMD2-202ENST00000454181 BRMS1Q9HCU9 246 aa26.43■■□□□ 1.82
LYSMD2-202ENST00000454181 IGSF9Q9P2J2 1179 aa26.43■■□□□ 1.82
LYSMD2-202ENST00000454181 CCDC195A0A1B0GUA6 201 aa26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 ARL5CA6NH57 179 aa26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 TSPAN1O60635 241 aa26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 GLUD1P00367 558 aa26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 MLH1P40692 756 aa26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 PTENP60484 403 aa26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 CYP26C1Q6V0L0 522 aa26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 CMASQ8NFW8 434 aaPredicted RBP26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 FEZF2Q8TBJ5 459 aa26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 OXER1Q8TDS5 423 aa26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 CPB2Q96IY4 423 aa26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 APOL6Q9BWW8 343 aa26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 EIF2AQ9BY44 585 aaKnown RBP26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 GJB4Q9NTQ9 266 aa26.42■■□□□ 1.82
LYSMD2-202ENST00000454181 ZBTB39O15060 712 aa26.41■■□□□ 1.82
LYSMD2-202ENST00000454181 TEX28O15482 410 aa26.41■■□□□ 1.82
LYSMD2-202ENST00000454181 GBP2P32456 591 aaPredicted RBP26.41■■□□□ 1.82
LYSMD2-202ENST00000454181 CSRNP2Q9H175 543 aa26.41■■□□□ 1.82
LYSMD2-202ENST00000454181 MARCH5Q9NX47 278 aa26.41■■□□□ 1.82
LYSMD2-202ENST00000454181 PCDHA12Q9UN75 941 aa26.41■■□□□ 1.82
LYSMD2-202ENST00000454181 DUSP12Q9UNI6 340 aa26.41■■□□□ 1.82
LYSMD2-202ENST00000454181 SLITRK3O94933 977 aa26.4■■□□□ 1.82
LYSMD2-202ENST00000454181 KRT2P35908 639 aa26.4■■□□□ 1.82
LYSMD2-202ENST00000454181 NBL1P41271 181 aa26.4■■□□□ 1.82
LYSMD2-202ENST00000454181 SCNN1GP51170 649 aa26.4■■□□□ 1.82
LYSMD2-202ENST00000454181 TAS1R1Q7RTX1 841 aa26.4■■□□□ 1.82
LYSMD2-202ENST00000454181 RNF39Q9H2S5 420 aa26.4■■□□□ 1.82
LYSMD2-202ENST00000454181 PIDD1Q9HB75 910 aa26.4■■□□□ 1.82
LYSMD2-202ENST00000454181 ORC3Q9UBD5 711 aaPredicted RBP26.4■■□□□ 1.82
LYSMD2-202ENST00000454181 GIT1Q9Y2X7 761 aa26.4■■□□□ 1.82
LYSMD2-202ENST00000454181 HES2Q9Y543 173 aa26.4■■□□□ 1.82
LYSMD2-202ENST00000454181 STK25O00506 426 aa26.39■■□□□ 1.82
LYSMD2-202ENST00000454181 INPPL1O15357 1258 aa26.39■■□□□ 1.82
LYSMD2-202ENST00000454181 PFKFB2O60825 505 aa26.39■■□□□ 1.82
LYSMD2-202ENST00000454181 DGAT1O75907 488 aa26.39■■□□□ 1.82
LYSMD2-202ENST00000454181 MYBP10242 640 aa26.39■■□□□ 1.82
LYSMD2-202ENST00000454181 RFX1P22670 979 aa26.39■■□□□ 1.82
LYSMD2-202ENST00000454181 POU5F1BQ06416 359 aa26.39■■□□□ 1.82
LYSMD2-202ENST00000454181 EIF2AK1Q9BQI3 630 aaKnown RBP26.39■■□□□ 1.82
LYSMD2-202ENST00000454181 RTP3Q9BQQ7 232 aa26.39■■□□□ 1.82
LYSMD2-202ENST00000454181 AOC1P19801 751 aa26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 DSC1Q08554 894 aa26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 SPIRE1Q08AE8 756 aa26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 KIAA0319Q5VV43 1072 aa26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 SIX5Q8N196 739 aa26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 SMG7Q92540 1137 aaKnown RBP26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 ZFP42Q96MM3 310 aa26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 RXFP1Q9HBX9 757 aa26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 WDR6Q9NNW5 1121 aaKnown RBP26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 XPNPEP1Q9NQW7 623 aa26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 ANKEF1Q9NU02 776 aa26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 TPCN1Q9ULQ1 816 aa26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 PTPRZ1P23471 2315 aaPredicted RBP26.38■■□□□ 1.81
LYSMD2-202ENST00000454181 USP34Q70CQ2 3546 aa26.37■■□□□ 1.81
LYSMD2-202ENST00000454181 DSG1Q02413 1049 aa26.37■■□□□ 1.81
LYSMD2-202ENST00000454181 CALCRLQ16602 461 aa26.37■■□□□ 1.81
LYSMD2-202ENST00000454181 CWF19L1Q69YN2 538 aaKnown RBP26.37■■□□□ 1.81
LYSMD2-202ENST00000454181 ASCL5Q7RTU5 278 aa26.37■■□□□ 1.81
LYSMD2-202ENST00000454181 PALB2Q86YC2 1186 aa26.37■■□□□ 1.81
LYSMD2-202ENST00000454181 IFNLR1Q8IU57 520 aaPredicted RBP26.37■■□□□ 1.81
LYSMD2-202ENST00000454181 HDAC7Q8WUI4 952 aa26.37■■□□□ 1.81
LYSMD2-202ENST00000454181 NKD2Q969F2 451 aaPredicted RBP26.37■■□□□ 1.81
LYSMD2-202ENST00000454181 RHOBTB2Q9BYZ6 727 aa26.37■■□□□ 1.81
LYSMD2-202ENST00000454181 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.37■■□□□ 1.81
LYSMD2-202ENST00000454181 MIOSQ9NXC5 875 aa26.37■■□□□ 1.81
LYSMD2-202ENST00000454181 PRR23AA6NEV1 266 aa26.36■■□□□ 1.81
LYSMD2-202ENST00000454181 SPATA31D3P0C874 917 aa26.36■■□□□ 1.81
LYSMD2-202ENST00000454181 ARF4P18085 180 aaPredicted RBP26.36■■□□□ 1.81
LYSMD2-202ENST00000454181 MBTD1Q05BQ5 628 aa26.36■■□□□ 1.81
LYSMD2-202ENST00000454181 NR5A1Q13285 461 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms