RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 TRIP11Q15643 1979 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 SPTBN5Q9NRC6 3674 aaKnown RBP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 H3BQ06 376 aaPredicted RBP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 K7ELQ4 463 aaPredicted RBP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 LINC01565O15544 149 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 ZNF623O75123 536 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 ZC3H11AO75152 810 aaKnown RBP eCLIP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 OFD1O75665 1012 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 ARF4P18085 180 aaPredicted RBP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 LIG1P18858 919 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 CYP11B2P19099 503 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 AXLP30530 894 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 PTPN5P54829 565 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 ERVFC1P60507 584 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 RNASELQ05823 741 aaKnown RBP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 NCBP1Q09161 790 aaKnown RBP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 E2F4Q16254 413 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 AMHR2Q16671 573 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 NOMO2Q5JPE7 1267 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 NOTUMQ6P988 496 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 GLB1LQ6UWU2 654 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 AGMOQ6ZNB7 445 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 MRPL10Q7Z7H8 261 aaKnown RBP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 SMG8Q8ND04 991 aaKnown RBP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 PABPC5Q96DU9 382 aaKnown RBP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 NECAB3Q96P71 396 aaPredicted RBP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 MMTAG2Q9BU76 263 aaKnown RBP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 APOL6Q9BWW8 343 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 MRPL9Q9BYD2 267 aaKnown RBP10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 CSRNP2Q9H175 543 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 TLR9Q9NR96 1032 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 DNM3Q9UQ16 869 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 HES2Q9Y543 173 aa10.47□□□□□ -0.73
CDC42EP3-203ENST00000453555 BRWD1Q9NSI6 2320 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 NPTXRO95502 500 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 EYA4O95677 639 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 POMCP01189 267 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 ITGA4P13612 1032 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 NCLP19338 710 aaKnown RBP10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 PDCP20941 246 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 SYT1P21579 422 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 NRIP1P48552 1158 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 ALDH7A1P49419 539 aaKnown RBP10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 AFF1P51825 1210 aaKnown RBP10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 BCAR1P56945 870 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 UBE3AQ05086 875 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 SF3A1Q15459 793 aaKnown RBP10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 CLUL1Q15846 466 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 CSPP1Q1MSJ5 1256 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 TMEM132AQ24JP5 1023 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 C6orf132Q5T0Z8 1188 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 PLPP4Q5VZY2 271 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 KCNK18Q7Z418 384 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 BRAPQ7Z569 592 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 ZBTB8OSQ8IWT0 167 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 URGCPQ8TCY9 931 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 MRPS27Q92552 414 aaKnown RBP10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 PNMA5Q96PV4 448 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 UHRF1Q96T88 793 aaPredicted RBP10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 NFKBIZQ9BYH8 718 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 TRIM6Q9C030 488 aaPredicted RBP10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 NRDE2Q9H7Z3 1164 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 RSAD1Q9HA92 442 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 TBC1D13Q9NVG8 400 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 SPG21Q9NZD8 308 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 DNAJB4Q9UDY4 337 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 USP20Q9Y2K6 914 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 IPPQ9Y573 584 aa10.46□□□□□ -0.73
CDC42EP3-203ENST00000453555 XIRP2A4UGR9 3374 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 A0A0C4DFX4 3053 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 CNTNAP2Q9UHC6 1331 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 PER2O15055 1255 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 DDHD2O94830 711 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 SSBP05455 408 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 CA8P35219 290 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 PPM1AP35813 382 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 NAMPTP43490 491 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 PLCB3Q01970 1234 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 KRT17Q04695 432 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 GRIN1Q05586 938 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 DLX2Q07687 328 aaPredicted RBP10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 RAD51AP2Q09MP3 1159 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 PPP2R5AQ15172 486 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 PCBP1Q15365 356 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 LEXMQ3ZCV2 418 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 ARL6IP4Q66PJ3 421 aaKnown RBP10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 CDCA2Q69YH5 1023 aaPredicted RBP10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 FAM173BQ6P4H8 233 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 SLC27A1Q6PCB7 646 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 CABP7Q86V35 215 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 ZNF280BQ86YH2 543 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 SLC39A11Q8N1S5 342 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 CNNM3Q8NE01 707 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 DEPTORQ8TB45 409 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 PPP2R3CQ969Q6 453 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 INTS4Q96HW7 963 aaKnown RBP10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 CDK5RAP3Q96JB5 506 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 IFT74Q96LB3 600 aa10.45□□□□□ -0.74
CDC42EP3-203ENST00000453555 KIFC3Q9BVG8 833 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms