RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 STRN3Q13033 797 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 TFDP1Q14186 410 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 ARHGEF6Q15052 776 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 KCNA10Q16322 511 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 AMHR2Q16671 573 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 FAM187BQ17R55 369 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 NBPF20Q3BBV1 942 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 FIGNQ5HY92 759 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 FKBP15Q5T1M5 1219 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 SLFN12LQ6IEE8 588 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 CXCL17Q6UXB2 119 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 CRELD2Q6UXH1 353 aaPredicted RBP6.55□□□□□ -1.36
SDC4P-201ENST00000453285 CBWD2Q8IUF1 395 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 TMEM139Q8IV31 216 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 ZBTB8OSQ8IWT0 167 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 GPD1LQ8N335 351 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 RDH13Q8NBN7 331 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 CCDC150Q8NCX0 1101 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 SLAIN1Q8ND83 568 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 POMGNT1Q8WZA1 660 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 SAAL1Q96ER3 474 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 NLRP4Q96MN2 994 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 KATNAL1Q9BW62 490 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 CDHR5Q9HBB8 845 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 SPC25Q9HBM1 224 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 PTPRHQ9HD43 1115 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 XPNPEP3Q9NQH7 507 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 PYCARDQ9ULZ3 195 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 CAPN11Q9UMQ6 739 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 AKT3Q9Y243 479 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 FRMD4BQ9Y2L6 1034 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 TRIM17Q9Y577 477 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.55□□□□□ -1.36
SDC4P-201ENST00000453285 PTCH2Q9Y6C5 1203 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 KIAA0100Q14667 2235 aaKnown RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 SCN5AQ14524 2016 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 A0A1W2PQJ5 194 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 TTC26A0AVF1 554 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 C17orf102A2RUQ5 167 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 GTPBP10A4D1E9 387 aaKnown RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 AKR1B15C9JRZ8 316 aaPredicted RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 INO80B-WBP1J3KQ70 363 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 PES1O00541 588 aaKnown RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 KIAA0391O15091 583 aaKnown RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 EPHB6O15197 1021 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 PMM2O15305 246 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 B4GALT5O43286 388 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 EXTL3O43909 919 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 ZEB2O60315 1214 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 FAM189A1O60320 539 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 MFAP3LO75121 409 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 CSDE1O75534 798 aaKnown RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 ASGR1P07306 291 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 TRIM49P0CI25 452 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 TRIM49CP0CI26 452 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 CYP2C9P11712 490 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 SLC9A1P19634 815 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 PON1P27169 355 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 PHKA2P46019 1235 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 FMO5P49326 533 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 VAMP7P51809 220 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 WNT7BP56706 349 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 NLRP11P59045 1033 aaKnown RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 CHMP4BP1P59074 171 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 CLDN10P78369 228 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 ENPEPQ07075 957 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 MCL1Q07820 350 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 CYP24A1Q07973 514 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 PPP3CAQ08209 521 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 TRIM14Q14142 442 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 SNRNP35Q16560 246 aaKnown RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 MAPK6Q16659 721 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 CBWD6Q4V339 395 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 CBWD3Q5JTY5 395 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 CBWD5Q5RIA9 395 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 ZBTB41Q5SVQ8 909 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 EEF1DP3Q658K8 133 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 GDF6Q6KF10 455 aaPredicted RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 TSHZ1Q6ZSZ6 1077 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 INTS8Q75QN2 995 aaKnown RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 SRGAP1Q7Z6B7 1085 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 ZNF410Q86VK4 478 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 SESTD1Q86VW0 696 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 ZSCAN30Q86W11 494 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 PPFIBP1Q86W92 1011 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 LMO3Q8TAP4 145 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 TMC2Q8TDI7 906 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 PARD3BQ8TEW8 1205 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 CPLX3Q8WVH0 158 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 DNAJB3Q8WWF6 145 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 BICD1Q96G01 975 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 PANX2Q96RD6 677 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 PPP1R16BQ96T49 567 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 NUP58Q9BVL2 599 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 MRPL4Q9BYD3 311 aaKnown RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 INO80BQ9C086 356 aaPredicted RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 GANQ9H2C0 597 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 HMX1Q9NP08 348 aaPredicted RBP6.54□□□□□ -1.36
SDC4P-201ENST00000453285 SIX2Q9NPC8 291 aa6.54□□□□□ -1.36
SDC4P-201ENST00000453285 AGPAT5Q9NUQ2 364 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms