RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 MAPK4P31152 587 aa12□□□□□ -0.49
DDR1-239ENST00000452441 SOX5P35711 763 aa12□□□□□ -0.49
DDR1-239ENST00000452441 MARCKSL1P49006 195 aa12□□□□□ -0.49
DDR1-239ENST00000452441 VAMP7P51809 220 aa12□□□□□ -0.49
DDR1-239ENST00000452441 SGO2Q562F6 1265 aa12□□□□□ -0.49
DDR1-239ENST00000452441 MCTP2Q6DN12 878 aa12□□□□□ -0.49
DDR1-239ENST00000452441 USP37Q86T82 979 aa12□□□□□ -0.49
DDR1-239ENST00000452441 SYT2Q8N9I0 419 aaPredicted RBP12□□□□□ -0.49
DDR1-239ENST00000452441 RBM46Q8TBY0 533 aaKnown RBP12□□□□□ -0.49
DDR1-239ENST00000452441 TMEM143Q96AN5 459 aa12□□□□□ -0.49
DDR1-239ENST00000452441 BUD13Q9BRD0 619 aaKnown RBP eCLIP12□□□□□ -0.493e-6■■■□□ 17.9
DDR1-239ENST00000452441 AS3MTQ9HBK9 375 aa12□□□□□ -0.49
DDR1-239ENST00000452441 ALG6Q9Y672 507 aa12□□□□□ -0.49
DDR1-239ENST00000452441 ZNF233A6NK53 670 aa12□□□□□ -0.49
DDR1-239ENST00000452441 DDX3XO00571 662 aaKnown RBP eCLIP12□□□□□ -0.495e-7■■■■■ 37.9
DDR1-239ENST00000452441 SGPL1O95470 568 aa12□□□□□ -0.49
DDR1-239ENST00000452441 YY1P25490 414 aa12□□□□□ -0.49
DDR1-239ENST00000452441 HSD17B3P37058 310 aa12□□□□□ -0.49
DDR1-239ENST00000452441 PDE6CP51160 858 aa12□□□□□ -0.49
DDR1-239ENST00000452441 GNPTABQ3T906 1256 aa12□□□□□ -0.49
DDR1-239ENST00000452441 ACCSQ96QU6 501 aa12□□□□□ -0.49
DDR1-239ENST00000452441 SH3GL2Q99962 352 aa12□□□□□ -0.49
DDR1-239ENST00000452441 IDI2Q9BXS1 227 aa12□□□□□ -0.49
DDR1-239ENST00000452441 EXOC7Q9UPT5 735 aa12□□□□□ -0.49
DDR1-239ENST00000452441 SNED1Q8TER0 1413 aa12□□□□□ -0.49
DDR1-239ENST00000452441 MYO3BQ8WXR4 1341 aa12□□□□□ -0.49
DDR1-239ENST00000452441 PLSCR1O15162 318 aa12□□□□□ -0.49
DDR1-239ENST00000452441 SLITRK3O94933 977 aa12□□□□□ -0.49
DDR1-239ENST00000452441 KRT15P19012 456 aa12□□□□□ -0.49
DDR1-239ENST00000452441 LMNB1P20700 586 aa12□□□□□ -0.49
DDR1-239ENST00000452441 SREBF1P36956 1147 aa12□□□□□ -0.49
DDR1-239ENST00000452441 POTEAQ6S8J7 498 aa12□□□□□ -0.49
DDR1-239ENST00000452441 RNF169Q8NCN4 708 aa12□□□□□ -0.49
DDR1-239ENST00000452441 KAT2BQ92831 832 aa12□□□□□ -0.49
DDR1-239ENST00000452441 P2RX7Q99572 595 aaKnown RBP12□□□□□ -0.49
DDR1-239ENST00000452441 VPS37BQ9H9H4 285 aa12□□□□□ -0.49
DDR1-239ENST00000452441 ELP3Q9H9T3 547 aa12□□□□□ -0.49
DDR1-239ENST00000452441 INTS9Q9NV88 658 aaKnown RBP12□□□□□ -0.49
DDR1-239ENST00000452441 SAMD15Q9P1V8 674 aa12□□□□□ -0.49
DDR1-239ENST00000452441 MAGED2Q9UNF1 606 aaPredicted RBP12□□□□□ -0.49
DDR1-239ENST00000452441 TMX2Q9Y320 296 aa12□□□□□ -0.49
DDR1-239ENST00000452441 PJA2O43164 708 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 EDIL3O43854 480 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 P4HBP07237 508 aaKnown RBP11.99□□□□□ -0.49
DDR1-239ENST00000452441 YWHABP31946 246 aaKnown RBP11.99□□□□□ -0.49
DDR1-239ENST00000452441 LSP1P33241 339 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 ORC1Q13415 861 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 LONRF1Q17RB8 773 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 MMS22LQ6ZRQ5 1243 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 SESTD1Q86VW0 696 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 TPCN2Q8NHX9 752 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 IL31RAQ8NI17 732 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 KRT35Q92764 455 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 CAVIN3Q969G5 261 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 SLC35C1Q96A29 364 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 PWWP2AQ96N64 755 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 NUP85Q9BW27 656 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 AGPAT3Q9NRZ7 376 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 CNOT8Q9UFF9 292 aaKnown RBP11.99□□□□□ -0.49
DDR1-239ENST00000452441 ZNF148Q9UQR1 794 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 MYH1P12882 1939 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 THAP12O43422 761 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 LCA5LO95447 670 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 TFAMQ00059 246 aaKnown RBP11.99□□□□□ -0.49
DDR1-239ENST00000452441 GLE1Q53GS7 698 aaKnown RBP11.99□□□□□ -0.49
DDR1-239ENST00000452441 C10orf76Q5T2E6 689 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 SPOPLQ6IQ16 392 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 CACNA2D3Q8IZS8 1091 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 GIMAP7Q8NHV1 300 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 CCT8L2Q96SF2 557 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 WDR18Q9BV38 432 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 RAB17Q9H0T7 212 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 AGTPBP1Q9UPW5 1226 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 PCDHB4Q9Y5E5 795 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 SBF2Q86WG5 1849 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 PDXKO00764 312 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 MAP3K6O95382 1288 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 SPATA31C1P0DKV0 1188 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 COMTP21964 271 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 SLC12A3P55017 1021 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 ORC2Q13416 577 aaPredicted RBP11.99□□□□□ -0.49
DDR1-239ENST00000452441 ASTE1Q2TB18 679 aaPredicted RBP11.99□□□□□ -0.49
DDR1-239ENST00000452441 MOB2Q70IA6 237 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 SLC47A2Q86VL8 602 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 FBXO25Q8TCJ0 367 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 C9orf72Q96LT7 481 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 BZW2Q9Y6E2 419 aaKnown RBP11.99□□□□□ -0.49
DDR1-239ENST00000452441 IVNS1ABPQ9Y6Y0 642 aa11.99□□□□□ -0.49
DDR1-239ENST00000452441 EPHA7Q15375 998 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 BSPRYQ5W0U4 402 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 CCDC137Q6PK04 289 aaKnown RBP11.98□□□□□ -0.49
DDR1-239ENST00000452441 TBC1D1Q86TI0 1168 aaPredicted RBP11.98□□□□□ -0.49
DDR1-239ENST00000452441 XXYLT1Q8NBI6 393 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 DCDC2CA8MYV0 355 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 DDNO94850 711 aaPredicted RBP11.98□□□□□ -0.49
DDR1-239ENST00000452441 MMEP08473 750 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 TRPC3Q13507 836 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 SLC29A2Q14542 456 aa11.98□□□□□ -0.49
DDR1-239ENST00000452441 KIAA1755Q5JYT7 1200 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms