RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 MINDY3Q9H8M7 445 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 MRPL17Q9NRX2 175 aaKnown RBP12.15□□□□□ -0.46
USP1-204ENST00000452143 DPP7Q9UHL4 492 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 SSX2IPQ9Y2D8 614 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 FAM186AA6NE01 2351 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 GVINP1Q7Z2Y8 2422 aa12.15□□□□□ -0.47
USP1-204ENST00000452143 MTCL1Q9Y4B5 1905 aaKnown RBP12.14□□□□□ -0.47
USP1-204ENST00000452143 MARCH6O60337 910 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 DDHD2O94830 711 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 PDGFBP01127 241 aaPredicted RBP12.14□□□□□ -0.47
USP1-204ENST00000452143 SOD2P04179 222 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 ALDH2P05091 517 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 URODP06132 367 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 WEE2P0C1S8 567 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 SRGAP2CP0DJJ0 459 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 KLRC2P26717 231 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 POU5F1BQ06416 359 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 NCBP1Q09161 790 aaKnown RBP12.14□□□□□ -0.47
USP1-204ENST00000452143 NCAPH2Q6IBW4 605 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 NOTUMQ6P988 496 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 ELMSAN1Q6PJG2 1045 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 TMC5Q6UXY8 1006 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 PIK3AP1Q6ZUJ8 805 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 OTOP3Q7RTS5 596 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
USP1-204ENST00000452143 C12orf76Q8N812 135 aaPredicted RBP12.14□□□□□ -0.47
USP1-204ENST00000452143 WASF1Q92558 559 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 KLHL5Q96PQ7 755 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 LARP6Q9BRS8 491 aaKnown RBP12.14□□□□□ -0.47
USP1-204ENST00000452143 RHOBTB2Q9BYZ6 727 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 FAN1Q9Y2M0 1017 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 ZMYM2Q9UBW7 1377 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 ZNF292O60281 2723 aa12.14□□□□□ -0.47
USP1-204ENST00000452143 NRP1O14786 923 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 TSPAN1O60635 241 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 PFKFB2O60825 505 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 LILRB3O75022 631 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 LYPLA2O95372 231 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 BAG4O95429 457 aaKnown RBP12.13□□□□□ -0.47
USP1-204ENST00000452143 POMCP01189 267 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 ADH1AP07327 375 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 CNPP09543 421 aaKnown RBP12.13□□□□□ -0.47
USP1-204ENST00000452143 ITGA4P13612 1032 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 AFF1P51825 1210 aaKnown RBP12.13□□□□□ -0.47
USP1-204ENST00000452143 CYP4A11Q02928 519 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 TFDP1Q14186 410 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 ANKRD1Q15327 319 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 XKR9Q5GH70 373 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 CYP26C1Q6V0L0 522 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 HACE1Q8IYU2 909 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 RNF168Q8IYW5 571 aaPredicted RBP12.13□□□□□ -0.47
USP1-204ENST00000452143 SMG8Q8ND04 991 aaKnown RBP12.13□□□□□ -0.47
USP1-204ENST00000452143 CMASQ8NFW8 434 aaPredicted RBP12.13□□□□□ -0.47
USP1-204ENST00000452143 OXER1Q8TDS5 423 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 ATOH1Q92858 354 aaPredicted RBP12.13□□□□□ -0.47
USP1-204ENST00000452143 HERC2P3Q9BVR0 1158 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 NFKBIZQ9BYH8 718 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 BRMS1Q9HCU9 246 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
USP1-204ENST00000452143 MARCH5Q9NX47 278 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 RGL1Q9NZL6 768 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 IPPQ9Y573 584 aa12.13□□□□□ -0.47
USP1-204ENST00000452143 PTPRZ1P23471 2315 aaPredicted RBP12.12□□□□□ -0.47
USP1-204ENST00000452143 DOCK8Q8NF50 2099 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 ARL5CA6NH57 179 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 PROB1E7EW31 1015 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 GFRA3O60609 400 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 NR1I2O75469 434 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 DGAT1O75907 488 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 C1RP00736 705 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 SSBP05455 408 aaKnown RBP eCLIP12.12□□□□□ -0.47
USP1-204ENST00000452143 ASGR2P07307 311 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 KRT2P35908 639 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 MLH1P40692 756 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 GLUD2P49448 558 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 CLCN5P51795 746 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 ANAPC15P60006 121 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 PTENP60484 403 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 DSC1Q08554 894 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 KANK3Q6NY19 840 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 COLGALT2Q8IYK4 626 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 TMEM105Q8N8V8 129 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 DYDC2Q96IM9 177 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 RPS6KC1Q96S38 1066 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 MFSD1Q9H3U5 465 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 XPNPEP1Q9NQW7 623 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 FAM86C1Q9NVL1 165 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 LIMD1Q9UGP4 676 aa12.12□□□□□ -0.47
USP1-204ENST00000452143 H0Y858 1186 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 INO80B-WBP1J3KQ70 363 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 SLITRK3O94933 977 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 EFEMP2O95967 443 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 GLUD1P00367 558 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 OR1G1P47890 313 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 AK2P54819 239 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 MBTD1Q05BQ5 628 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 TDGQ13569 410 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 CTTNQ14247 550 aaKnown RBP12.11□□□□□ -0.47
USP1-204ENST00000452143 TPH2Q8IWU9 490 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 GPR65Q8IYL9 337 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms