RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	NOL7	Q9UMY1	257 aa	Known RBP	9.65	□□□□□ -0.86
RFX3-209	ENST00000451859	FAM50B	Q9Y247	325 aa		9.65	□□□□□ -0.86
RFX3-209	ENST00000451859	PPME1	Q9Y570	386 aa		9.65	□□□□□ -0.86
RFX3-209	ENST00000451859	PCDHB2	Q9Y5E7	798 aa		9.65	□□□□□ -0.86
RFX3-209	ENST00000451859	LRRIQ4	A6NIV6	560 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	HIDE1	A8MVS5	230 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	MBTPS2	O43462	519 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	GAS2	O43903	313 aa	Known RBP	9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	MED24	O75448	989 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	DGAT1	O75907	488 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	GLP2R	O95838	553 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	SKI	P12755	728 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	PPM1A	P35813	382 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	ALDH7A1	P49419	539 aa	Known RBP	9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	RBM25	P49756	843 aa	Known RBP	9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	RARRES1	P49788	294 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	BCAR1	P56945	870 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	KRT17	Q04695	432 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	ADAM15	Q13444	863 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	SMAD4	Q13485	552 aa	Known RBP	9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	CAPS	Q13938	189 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	TFDP1	Q14186	410 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	RABEP1	Q15276	862 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	MCTP1	Q6DN14	999 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	TMC7	Q7Z402	723 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	TMEM173	Q86WV6	379 aa	Predicted RBP	9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	CDR2L	Q86X02	465 aa	Predicted RBP	9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	NOSTRIN	Q8IVI9	506 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	SLC39A11	Q8N1S5	342 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	EFHB	Q8N7U6	833 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	URGCP	Q8TCY9	931 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	AUTS2	Q8WXX7	1259 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	TMEM169	Q96HH4	297 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	APOL5	Q9BWW9	433 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	POLR3F	Q9H1D9	316 aa	Predicted RBP	9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	UPF2	Q9HAU5	1272 aa	Known RBP	9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	ANKEF1	Q9NU02	776 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	TBC1D13	Q9NVG8	400 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	CLEC1B	Q9P126	229 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	MYH15	Q9Y2K3	1946 aa		9.64	□□□□□ -0.87
RFX3-209	ENST00000451859	ASAP2	O43150	1006 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	TSPAN1	O60635	241 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	LYPLA2	O95372	231 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	CD2BP2	O95400	341 aa	Known RBP	9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	POMC	P01189	267 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	SPATA31C1	P0DKV0	1188 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	LIG1	P18858	919 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	GLRA2	P23416	452 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	AFF1	P51825	1210 aa	Known RBP	9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	PTEN	P60484	403 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	PLCB3	Q01970	1234 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	ZP2	Q05996	745 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	MXD4	Q14582	209 aa	Predicted RBP	9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	DUSP6	Q16828	381 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	TMEM132A	Q24JP5	1023 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	NOMO2	Q5JPE7	1267 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	CATSPER3	Q86XQ3	398 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	VN1R2	Q8NFZ6	395 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	ERMN	Q8TAM6	284 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	PGBD4	Q96DM1	585 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	FAM193B	Q96PV7	902 aa	Predicted RBP	9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	EIF2A	Q9BY44	585 aa	Known RBP	9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	TRIM6	Q9C030	488 aa	Predicted RBP	9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	NRDE2	Q9H7Z3	1164 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	RSAD1	Q9HA92	442 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	POLD4	Q9HCU8	107 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	TUFT1	Q9NNX1	390 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	DNAJB4	Q9UDY4	337 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	HES2	Q9Y543	173 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	PDCD11	Q14690	1871 aa	Known RBP	9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	DOCK6	Q96HP0	2047 aa		9.63	□□□□□ -0.87
RFX3-209	ENST00000451859	DENND4A	Q7Z401	1863 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	ARHGEF35	A5YM69	484 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	FSCN2	O14926	492 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	B4GALT5	O43286	388 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	MAP3K7	O43318	606 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	B4GALT3	O60512	393 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	OFD1	O75665	1012 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	NPTXR	O95502	500 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	SSB	P05455	408 aa	Known RBP eCLIP	9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	ITGA4	P13612	1032 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	HOXA11	P31270	313 aa	Predicted RBP	9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	ARL2	P36404	184 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	CCT6A	P40227	531 aa	Known RBP	9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	PRSS12	P56730	875 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	MBTD1	Q05BQ5	628 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	SMC1A	Q14683	1233 aa	Known RBP	9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	SMAD2	Q15796	467 aa	Known RBP	9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	UBXN11	Q5T124	520 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	PDE12	Q6L8Q7	609 aa	Known RBP	9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	NOTUM	Q6P988	496 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	PADI6	Q6TGC4	694 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	AGMO	Q6ZNB7	445 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	ZNF280B	Q86YH2	543 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	ADHFE1	Q8IWW8	467 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	TMEM87A	Q8NBN3	555 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	BCL7C	Q8WUZ0	217 aa	Predicted RBP	9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	MSLNL	Q96KJ4	702 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	TRAIP	Q9BWF2	469 aa		9.62	□□□□□ -0.87
RFX3-209	ENST00000451859	C1QTNF1	Q9BXJ1	281 aa		9.62	□□□□□ -0.87

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