RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 KCNH3Q9ULD8 1083 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 TNFSF13BQ9Y275 285 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 MRPL42Q9Y6G3 142 aaKnown RBP15.81■□□□□ 0.12
COL3A1-203ENST00000450867 POLR2DO15514 142 aaKnown RBP15.8■□□□□ 0.12
COL3A1-203ENST00000450867 KRT18P05783 430 aaKnown RBP15.8■□□□□ 0.12
COL3A1-203ENST00000450867 PFKFB1P16118 471 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 GAP43P17677 238 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 PROZP22891 400 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 AGMOQ6ZNB7 445 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 HAUS6Q7Z4H7 955 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 DHX58Q96C10 678 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 ACO2Q99798 780 aaKnown RBP15.8■□□□□ 0.12
COL3A1-203ENST00000450867 TRIM9Q9C026 710 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 PTPRHQ9HD43 1115 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 UBN1Q9NPG3 1134 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 OLFML3Q9NRN5 406 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 CHMP5Q9NZZ3 219 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 USP25Q9UHP3 1055 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 IPPQ9Y573 584 aa15.8■□□□□ 0.12
COL3A1-203ENST00000450867 MYO7AQ13402 2215 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 EPOPA6NHQ4 379 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 TBKBP1A7MCY6 615 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 MEIS3P2A8K0S8 358 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 ABLIM1O14639 778 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 TRAK2O60296 914 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 PIGRP01833 764 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 RB1P06400 928 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 SLFN14P0C7P3 912 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 BMPR1AP36894 532 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 GTF2BQ00403 316 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 AMPD3Q01432 767 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 DCAF4L1Q3SXM0 396 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 EPC2Q52LR7 807 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 ATF7IP2Q5U623 682 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 ZPBP2Q6X784 338 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 DYMQ7RTS9 669 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 TMEM192Q8IY95 271 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 LRRC43Q8N309 656 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 MYCT1Q8N699 235 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 HELQQ8TDG4 1101 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 P2RX5Q93086 422 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 FAM161BQ96MY7 647 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 C7orf25Q9BPX7 421 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 C17orf80Q9BSJ5 609 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 STRA6Q9BX79 667 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 PLVAPQ9BX97 442 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 MRPL9Q9BYD2 267 aaKnown RBP15.79■□□□□ 0.12
COL3A1-203ENST00000450867 MRPL4Q9BYD3 311 aaKnown RBP15.79■□□□□ 0.12
COL3A1-203ENST00000450867 CWH43Q9H720 699 aa15.79■□□□□ 0.12
COL3A1-203ENST00000450867 ANK1P16157 1881 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 REV3LO60673 3130 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 ACTN4O43707 911 aaKnown RBP15.78■□□□□ 0.12
COL3A1-203ENST00000450867 LPXNO60711 386 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 OFD1O75665 1012 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 PPP1R37O75864 691 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 PAN2Q504Q3 1202 aaKnown RBP15.78■□□□□ 0.12
COL3A1-203ENST00000450867 EEF1DP3Q658K8 133 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 GLB1LQ6UWU2 654 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 LRRC55Q6ZSA7 311 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 RNF169Q8NCN4 708 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 FBXO22Q8NEZ5 403 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 ARNTL2Q8WYA1 636 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 LPPQ93052 612 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 HVCN1Q96D96 273 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 NXF3Q9H4D5 531 aaKnown RBP15.78■□□□□ 0.12
COL3A1-203ENST00000450867 PRDM12Q9H4Q4 367 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 RSAD1Q9HA92 442 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 GDPD2Q9HCC8 539 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 GIT1Q9Y2X7 761 aa15.78■□□□□ 0.12
COL3A1-203ENST00000450867 COL6A3P12111 3177 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 BRWD1Q9NSI6 2320 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 A0A1B0GVL5 298 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 H3BNC9 293 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 NPTXRO95502 500 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 ITGA4P13612 1032 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 EHHADHQ08426 723 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 STRN3Q13033 797 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 ADGRE1Q14246 886 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 NOMO2Q5JPE7 1267 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 ZNF720Q7Z2F6 126 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 APBB1IPQ7Z5R6 666 aaPredicted RBP15.77■□□□□ 0.12
COL3A1-203ENST00000450867 CDR2LQ86X02 465 aaPredicted RBP15.77■□□□□ 0.12
COL3A1-203ENST00000450867 SFR1Q86XK3 245 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 MAP4K3Q8IVH8 894 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 FAM178BQ8IXR5 827 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 HACE1Q8IYU2 909 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 ABI1Q8IZP0 508 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 MYLIPQ8WY64 445 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 MRPS27Q92552 414 aaKnown RBP15.77■□□□□ 0.12
COL3A1-203ENST00000450867 ADPGKQ9BRR6 497 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 TRIM6Q9C030 488 aaPredicted RBP15.77■□□□□ 0.12
COL3A1-203ENST00000450867 TYW1Q9NV66 732 aaKnown RBP15.77■□□□□ 0.12
COL3A1-203ENST00000450867 LMCD1Q9NZU5 365 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 TBX20Q9UMR3 447 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 USP20Q9Y2K6 914 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 STXBP5LQ9Y2K9 1186 aa15.77■□□□□ 0.12
COL3A1-203ENST00000450867 CARNS1A5YM72 827 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 K7ENM7 598 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 TOM1L1O75674 476 aa15.76■□□□□ 0.11
COL3A1-203ENST00000450867 SLC34A2O95436 690 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms