RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 ARF4P18085 180 aaPredicted RBP17.74■□□□□ 0.43
SGCE-208ENST00000450385 SSTR3P32745 418 aaPredicted RBP17.74■□□□□ 0.43
SGCE-208ENST00000450385 MAPK6Q16659 721 aa17.74■□□□□ 0.43
SGCE-208ENST00000450385 TPRNQ4KMQ1 711 aa17.74■□□□□ 0.43
SGCE-208ENST00000450385 PLPP4Q5VZY2 271 aa17.74■□□□□ 0.43
SGCE-208ENST00000450385 APBB1IPQ7Z5R6 666 aaPredicted RBP17.74■□□□□ 0.43
SGCE-208ENST00000450385 GPR65Q8IYL9 337 aa17.74■□□□□ 0.43
SGCE-208ENST00000450385 TMEM87AQ8NBN3 555 aa17.74■□□□□ 0.43
SGCE-208ENST00000450385 SMG8Q8ND04 991 aaKnown RBP17.74■□□□□ 0.43
SGCE-208ENST00000450385 BMP2KQ9NSY1 1161 aaPredicted RBP17.74■□□□□ 0.43
SGCE-208ENST00000450385 SMC3Q9UQE7 1217 aa17.74■□□□□ 0.43
SGCE-208ENST00000450385 FAN1Q9Y2M0 1017 aa17.74■□□□□ 0.43
SGCE-208ENST00000450385 ARIH1Q9Y4X5 557 aaPredicted RBP17.74■□□□□ 0.43
SGCE-208ENST00000450385 PCDHB6Q9Y5E3 794 aa17.74■□□□□ 0.43
SGCE-208ENST00000450385 LRRIQ4A6NIV6 560 aa17.73■□□□□ 0.43
SGCE-208ENST00000450385 CXCL14O95715 111 aa17.73■□□□□ 0.43
SGCE-208ENST00000450385 BMP15O95972 392 aa17.73■□□□□ 0.43
SGCE-208ENST00000450385 GJB2P29033 226 aa17.73■□□□□ 0.43
SGCE-208ENST00000450385 ITIH3Q06033 890 aa17.73■□□□□ 0.43
SGCE-208ENST00000450385 MCTP1Q6DN14 999 aa17.73■□□□□ 0.43
SGCE-208ENST00000450385 POTEGQ6S5H5 508 aa17.73■□□□□ 0.43
SGCE-208ENST00000450385 VPS52Q8N1B4 723 aa17.73■□□□□ 0.43
SGCE-208ENST00000450385 NT5C3AQ9H0P0 336 aa17.73■□□□□ 0.43
SGCE-208ENST00000450385 ZBP1Q9H171 429 aa17.73■□□□□ 0.43
SGCE-208ENST00000450385 KIAA1024Q9UPX6 916 aa17.73■□□□□ 0.43
SGCE-208ENST00000450385 INPP5FQ9Y2H2 1132 aa17.73■□□□□ 0.43
SGCE-208ENST00000450385 ARL5CA6NH57 179 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 MEIS3P2A8K0S8 358 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 ACKR2O00590 384 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 N4BP3O15049 544 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 PER2O15055 1255 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 PDCP20941 246 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 ATP2C1P98194 919 aaPredicted RBP17.72■□□□□ 0.43
SGCE-208ENST00000450385 SUSD6Q92537 303 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 AK8Q96MA6 479 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 ADPGKQ9BRR6 497 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 PHF7Q9BWX1 381 aaPredicted RBP17.72■□□□□ 0.43
SGCE-208ENST00000450385 BHMT2Q9H2M3 363 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 CD320Q9NPF0 282 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 DZANK1Q9NVP4 752 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 KCND2Q9NZV8 630 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 DPP7Q9UHL4 492 aa17.72■□□□□ 0.43
SGCE-208ENST00000450385 HIDE1A8MVS5 230 aa17.71■□□□□ 0.43
SGCE-208ENST00000450385 PBX3P40426 434 aa17.71■□□□□ 0.43
SGCE-208ENST00000450385 DSC1Q08554 894 aa17.71■□□□□ 0.43
SGCE-208ENST00000450385 TMEM31Q5JXX7 168 aa17.71■□□□□ 0.43
SGCE-208ENST00000450385 HYIQ5T013 277 aa17.71■□□□□ 0.43
SGCE-208ENST00000450385 LARP1BQ659C4 914 aaKnown RBP17.71■□□□□ 0.43
SGCE-208ENST00000450385 ANKRD54Q6NXT1 300 aa17.71■□□□□ 0.43
SGCE-208ENST00000450385 BRAPQ7Z569 592 aa17.71■□□□□ 0.43
SGCE-208ENST00000450385 ZNF280BQ86YH2 543 aa17.71■□□□□ 0.43
SGCE-208ENST00000450385 DEPTORQ8TB45 409 aa17.71■□□□□ 0.43
SGCE-208ENST00000450385 SNX29Q8TEQ0 813 aa17.71■□□□□ 0.43
SGCE-208ENST00000450385 NECTIN4Q96NY8 510 aa17.71■□□□□ 0.43
SGCE-208ENST00000450385 EMILIN2Q9BXX0 1053 aa17.71■□□□□ 0.43
SGCE-208ENST00000450385 EIF2AQ9BY44 585 aaKnown RBP17.71■□□□□ 0.43
SGCE-208ENST00000450385 DDX19AQ9NUU7 478 aaKnown RBP17.71■□□□□ 0.43
SGCE-208ENST00000450385 RBM19Q9Y4C8 960 aaKnown RBP17.71■□□□□ 0.43
SGCE-208ENST00000450385 NT5C1B-RDH14C9J2C7 533 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 NRP1O14786 923 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 DCXO43602 365 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 DDHD2O94830 711 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 CSPG5O95196 566 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 SCP2P22307 547 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 SLC11A1P49279 550 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 PRPF4BQ13523 1007 aaKnown RBP17.7■□□□□ 0.42
SGCE-208ENST00000450385 CBX2Q14781 532 aaPredicted RBP17.7■□□□□ 0.42
SGCE-208ENST00000450385 CES5AQ6NT32 575 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 COLGALT2Q8IYK4 626 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 CPB2Q96IY4 423 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 DRC1Q96MC2 740 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 COLEC11Q9BWP8 271 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 S1PR5Q9H228 398 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 EPHX3Q9H6B9 360 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 GPRC5CQ9NQ84 441 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 DNAJB4Q9UDY4 337 aa17.7■□□□□ 0.42
SGCE-208ENST00000450385 BARX2Q9UMQ3 279 aaPredicted RBP17.7■□□□□ 0.42
SGCE-208ENST00000450385 USP15Q9Y4E8 981 aaPredicted RBP17.7■□□□□ 0.42
SGCE-208ENST00000450385 A0A087WWV3 80 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 LOC730098B7Z3J9 87 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 CLASP2O75122 1294 aaKnown RBP17.69■□□□□ 0.42
SGCE-208ENST00000450385 GRIK3Q13003 919 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 CUL4AQ13619 759 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 CLUL1Q15846 466 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 ECM1Q16610 540 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 DCAF4L1Q3SXM0 396 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 LONRF3Q496Y0 759 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 HERC4Q5GLZ8 1057 aaPredicted RBP17.69■□□□□ 0.42
SGCE-208ENST00000450385 ELMSAN1Q6PJG2 1045 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 MAEAQ7L5Y9 396 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 VN1R2Q8NFZ6 395 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 GAD1Q99259 594 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 NTPCRQ9BSD7 190 aaKnown RBP17.69■□□□□ 0.42
SGCE-208ENST00000450385 CCDC113Q9H0I3 377 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 GBP3Q9H0R5 595 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 TMEM134Q9H6X4 195 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 MRPL17Q9NRX2 175 aaKnown RBP17.69■□□□□ 0.42
SGCE-208ENST00000450385 PCDHGC5Q9Y5F6 944 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 HCFC2Q9Y5Z7 792 aa17.69■□□□□ 0.42
SGCE-208ENST00000450385 MYH11P35749 1972 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms