RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 KIF2CQ99661 725 aa24.32■■□□□ 1.48
CPSF7-208ENST00000450000 EMILIN2Q9BXX0 1053 aa24.32■■□□□ 1.48
CPSF7-208ENST00000450000 ZBP1Q9H171 429 aa24.32■■□□□ 1.48
CPSF7-208ENST00000450000 C2orf40Q9H1Z8 148 aa24.32■■□□□ 1.48
CPSF7-208ENST00000450000 GPRC5CQ9NQ84 441 aa24.32■■□□□ 1.48
CPSF7-208ENST00000450000 LRWD1Q9UFC0 647 aa24.32■■□□□ 1.48
CPSF7-208ENST00000450000 ATG2AQ2TAZ0 1938 aa24.31■■□□□ 1.48
CPSF7-208ENST00000450000 DDHD2O94830 711 aa24.31■■□□□ 1.48
CPSF7-208ENST00000450000 ARF4P18085 180 aaPredicted RBP24.31■■□□□ 1.48
CPSF7-208ENST00000450000 OR1G1P47890 313 aa24.31■■□□□ 1.48
CPSF7-208ENST00000450000 SLC27A1Q6PCB7 646 aa24.31■■□□□ 1.48
CPSF7-208ENST00000450000 PADI6Q6TGC4 694 aa24.31■■□□□ 1.48
CPSF7-208ENST00000450000 PPFIBP1Q86W92 1011 aa24.31■■□□□ 1.48
CPSF7-208ENST00000450000 TMEM173Q86WV6 379 aaPredicted RBP24.31■■□□□ 1.48
CPSF7-208ENST00000450000 SMG8Q8ND04 991 aaKnown RBP24.31■■□□□ 1.48
CPSF7-208ENST00000450000 AUTS2Q8WXX7 1259 aa24.31■■□□□ 1.48
CPSF7-208ENST00000450000 FAM122AQ96E09 287 aa24.31■■□□□ 1.48
CPSF7-208ENST00000450000 GAD1Q99259 594 aa24.31■■□□□ 1.48
CPSF7-208ENST00000450000 PRMT7Q9NVM4 692 aaPredicted RBP24.31■■□□□ 1.48
CPSF7-208ENST00000450000 PARP2Q9UGN5 583 aa24.31■■□□□ 1.48
CPSF7-208ENST00000450000 GIT1Q9Y2X7 761 aa24.31■■□□□ 1.48
CPSF7-208ENST00000450000 ARL5CA6NH57 179 aa24.3■■□□□ 1.48
CPSF7-208ENST00000450000 NPTXRO95502 500 aa24.3■■□□□ 1.48
CPSF7-208ENST00000450000 SSBP05455 408 aaKnown RBP eCLIP24.3■■□□□ 1.48
CPSF7-208ENST00000450000 LIG1P18858 919 aa24.3■■□□□ 1.48
CPSF7-208ENST00000450000 MUTP22033 750 aa24.3■■□□□ 1.48
CPSF7-208ENST00000450000 MLH1P40692 756 aa24.3■■□□□ 1.48
CPSF7-208ENST00000450000 PPP2R5AQ15172 486 aa24.3■■□□□ 1.48
CPSF7-208ENST00000450000 DEPTORQ8TB45 409 aa24.3■■□□□ 1.48
CPSF7-208ENST00000450000 IFT74Q96LB3 600 aa24.3■■□□□ 1.48
CPSF7-208ENST00000450000 C11orf16Q9NQ32 467 aa24.3■■□□□ 1.48
CPSF7-208ENST00000450000 DZANK1Q9NVP4 752 aa24.3■■□□□ 1.48
CPSF7-208ENST00000450000 SSX2IPQ9Y2D8 614 aa24.3■■□□□ 1.48
CPSF7-208ENST00000450000 PRG3Q9Y2Y8 225 aaPredicted RBP24.3■■□□□ 1.48
CPSF7-208ENST00000450000 HES2Q9Y543 173 aa24.3■■□□□ 1.48
CPSF7-208ENST00000450000 H3BQV1 296 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 NRP1O14786 923 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 KLRC2P26717 231 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 FXR2P51116 673 aaKnown RBP eCLIP24.29■■□□□ 1.48
CPSF7-208ENST00000450000 ITIH3Q06033 890 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 KCNC3Q14003 757 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 HERC4Q5GLZ8 1057 aaPredicted RBP24.29■■□□□ 1.48
CPSF7-208ENST00000450000 SYCE2Q6PIF2 218 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 ZBTB33Q86T24 672 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 SUSD6Q92537 303 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 PRIMPOLQ96LW4 560 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 RIPOR3Q96MK2 946 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 NECTIN4Q96NY8 510 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 RPS6KC1Q96S38 1066 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 S1PR5Q9H228 398 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 TSHZ2Q9NRE2 1034 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 MRPL17Q9NRX2 175 aaKnown RBP24.29■■□□□ 1.48
CPSF7-208ENST00000450000 NR2E1Q9Y466 385 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 IRAK3Q9Y616 596 aa24.29■■□□□ 1.48
CPSF7-208ENST00000450000 LOC730098B7Z3J9 87 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 B4GALT5O43286 388 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 URODP06132 367 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 CYP11B2P19099 503 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 U2AF2P26368 475 aaKnown RBP eCLIP24.28■■□□□ 1.489e-9■■■□□ 15
CPSF7-208ENST00000450000 SCNN1GP51170 649 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 AFF1P51825 1210 aaKnown RBP24.28■■□□□ 1.48
CPSF7-208ENST00000450000 NBR1Q14596 966 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 MAPK6Q16659 721 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 KRT79Q5XKE5 535 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 KIAA1841Q6NSI8 718 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 CABP7Q86V35 215 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 CDR2LQ86X02 465 aaPredicted RBP24.28■■□□□ 1.48
CPSF7-208ENST00000450000 SNX29Q8TEQ0 813 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 ADPGKQ9BRR6 497 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 COLEC11Q9BWP8 271 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 RNF39Q9H2S5 420 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 KIAA1024Q9UPX6 916 aa24.28■■□□□ 1.48
CPSF7-208ENST00000450000 LAD1O00515 517 aa24.27■■□□□ 1.48
CPSF7-208ENST00000450000 AKAP5P24588 427 aa24.27■■□□□ 1.48
CPSF7-208ENST00000450000 PTGDRQ13258 359 aa24.27■■□□□ 1.48
CPSF7-208ENST00000450000 PRPF4BQ13523 1007 aaKnown RBP24.27■■□□□ 1.48
CPSF7-208ENST00000450000 PDIA5Q14554 519 aa24.27■■□□□ 1.48
CPSF7-208ENST00000450000 AMHR2Q16671 573 aa24.27■■□□□ 1.48
CPSF7-208ENST00000450000 ELMSAN1Q6PJG2 1045 aa24.27■■□□□ 1.48
CPSF7-208ENST00000450000 BCL7CQ8WUZ0 217 aaPredicted RBP24.27■■□□□ 1.48
CPSF7-208ENST00000450000 ADAM7Q9H2U9 754 aa24.27■■□□□ 1.48
CPSF7-208ENST00000450000 NXF3Q9H4D5 531 aaKnown RBP24.27■■□□□ 1.48
CPSF7-208ENST00000450000 A0A1B0GUA9 196 aa24.26■■□□□ 1.47
CPSF7-208ENST00000450000 C2CD2LO14523 706 aa24.26■■□□□ 1.47
CPSF7-208ENST00000450000 N4BP3O15049 544 aa24.26■■□□□ 1.47
CPSF7-208ENST00000450000 MTHFRP42898 656 aa24.26■■□□□ 1.47
CPSF7-208ENST00000450000 PTPN14Q15678 1187 aa24.26■■□□□ 1.47
CPSF7-208ENST00000450000 ATAT1Q5SQI0 421 aa24.26■■□□□ 1.47
CPSF7-208ENST00000450000 RARS2Q5T160 578 aaKnown RBP24.26■■□□□ 1.47
CPSF7-208ENST00000450000 DTHD1Q6ZMT9 781 aa24.26■■□□□ 1.47
CPSF7-208ENST00000450000 ZFP42Q96MM3 310 aa24.26■■□□□ 1.47
CPSF7-208ENST00000450000 BHMT2Q9H2M3 363 aa24.26■■□□□ 1.47
CPSF7-208ENST00000450000 SP100P23497 879 aaPredicted RBP24.25■■□□□ 1.47
CPSF7-208ENST00000450000 NAMPTP43490 491 aa24.25■■□□□ 1.47
CPSF7-208ENST00000450000 MCM2P49736 904 aa24.25■■□□□ 1.47
CPSF7-208ENST00000450000 PPP4R3CPQ6ZMV5 832 aa24.25■■□□□ 1.47
CPSF7-208ENST00000450000 APBB1IPQ7Z5R6 666 aaPredicted RBP24.25■■□□□ 1.47
CPSF7-208ENST00000450000 COLGALT2Q8IYK4 626 aa24.25■■□□□ 1.47
CPSF7-208ENST00000450000 EDAQ92838 391 aa24.25■■□□□ 1.47
CPSF7-208ENST00000450000 KIFAP3Q92845 792 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms