RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 GCOM1H8Y6P7 765 aaPredicted RBP9.04□□□□□ -0.96
LINC01961-201ENST00000449954 ZC3H11AO75152 810 aaKnown RBP eCLIP9.04□□□□□ -0.96
LINC01961-201ENST00000449954 ADH1AP07327 375 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 CNPP09543 421 aaKnown RBP9.04□□□□□ -0.96
LINC01961-201ENST00000449954 POLR2MP0CAP2 368 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 SPINK2P20155 84 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 MRPS9P82933 396 aaKnown RBP9.04□□□□□ -0.96
LINC01961-201ENST00000449954 TRAF1Q13077 416 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 DSC3Q14574 896 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 SF3A2Q15428 464 aaKnown RBP9.04□□□□□ -0.96
LINC01961-201ENST00000449954 TPRG1Q6ZUI0 275 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 FTSJ3Q8IY81 847 aaKnown RBP9.04□□□□□ -0.96
LINC01961-201ENST00000449954 ADAM32Q8TC27 787 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 HDAC7Q8WUI4 952 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 TMEM40Q8WWA1 233 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 FGF14Q92915 247 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 ZBTB10Q96DT7 871 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 LOXL4Q96JB6 756 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 PCMTD1Q96MG8 357 aaPredicted RBP9.04□□□□□ -0.96
LINC01961-201ENST00000449954 BCL11AQ9H165 835 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 PIDD1Q9HB75 910 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 SENP2Q9HC62 589 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 GPSM3Q9Y4H4 160 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 TELO2Q9Y4R8 837 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 NEUROG3Q9Y4Z2 214 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 KALRNO60229 2985 aa9.04□□□□□ -0.96
LINC01961-201ENST00000449954 HMMRO75330 724 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 GLUD1P00367 558 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 ZSCAN20P17040 1043 aaPredicted RBP9.03□□□□□ -0.96
LINC01961-201ENST00000449954 CD72P21854 359 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 CLLU1OSQ5K130 101 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 FAM228AQ86W67 206 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 TMEM173Q86WV6 379 aaPredicted RBP9.03□□□□□ -0.96
LINC01961-201ENST00000449954 PROSER1Q86XN7 944 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 ECHDC2Q86YB7 292 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 LURAP1LQ8IV03 231 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 ZNF707Q96C28 371 aaPredicted RBP9.03□□□□□ -0.96
LINC01961-201ENST00000449954 CDHR1Q96JP9 859 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 AZI2Q9H6S1 392 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 JMJD4Q9H9V9 463 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 MRPL17Q9NRX2 175 aaKnown RBP9.03□□□□□ -0.96
LINC01961-201ENST00000449954 ZDHHC7Q9NXF8 308 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 SSX2IPQ9Y2D8 614 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 TENM4Q6N022 2769 aa9.03□□□□□ -0.96
LINC01961-201ENST00000449954 ADH1CP00326 375 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 C1RP00736 705 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 PCP11498 1178 aaKnown RBP9.02□□□□□ -0.97
LINC01961-201ENST00000449954 SNRPBP14678 240 aaKnown RBP9.02□□□□□ -0.97
LINC01961-201ENST00000449954 CRYBB1P53674 252 aaPredicted RBP9.02□□□□□ -0.97
LINC01961-201ENST00000449954 FZD5Q13467 585 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 PLCB4Q15147 1175 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 NR6A1Q15406 480 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 RRP12Q5JTH9 1297 aaKnown RBP9.02□□□□□ -0.97
LINC01961-201ENST00000449954 RNF43Q68DV7 783 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 MTHFD1LQ6UB35 978 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 PARM1Q6UWI2 310 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 CEP68Q76N32 757 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 NLRX1Q86UT6 975 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 LONP2Q86WA8 852 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 FCHSD1Q86WN1 690 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 RNF169Q8NCN4 708 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 PNMA1Q8ND90 353 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 HELQQ8TDG4 1101 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 CDK15Q96Q40 435 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 PLEKHA4Q9H4M7 779 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 ECHDC1Q9NTX5 307 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 CDH7Q9ULB5 785 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 CELSR3Q9NYQ7 3312 aa9.02□□□□□ -0.97
LINC01961-201ENST00000449954 GSTTP1A0A1W2PQM5 241 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 CYSRT1A8MQ03 144 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 MAN2B1O00754 1011 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 ZBTB5O15062 677 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 ANP32CO43423 234 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 RFPL2O75678 378 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 EPN2O95208 641 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 PAPSS2O95340 614 aaPredicted RBP9.01□□□□□ -0.97
LINC01961-201ENST00000449954 URODP06132 367 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 CEACAM1P13688 526 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 KCNA2P16389 499 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 NCLP19338 710 aaKnown RBP9.01□□□□□ -0.97
LINC01961-201ENST00000449954 CXCL12P48061 93 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 NT5C2P49902 561 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 WDR4P57081 412 aaKnown RBP9.01□□□□□ -0.97
LINC01961-201ENST00000449954 C19orf57Q0VDD7 668 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 CCDC6Q16204 474 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 DAB2IPQ5VWQ8 1189 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 PCNX4Q63HM2 1172 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 DGKHQ86XP1 1220 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 TRAPPC12Q8WVT3 735 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 GPRASP2Q96D09 838 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 GPATCH3Q96I76 525 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 RPP25Q9BUL9 199 aaKnown RBP9.01□□□□□ -0.97
LINC01961-201ENST00000449954 PHF20Q9BVI0 1012 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 ARRDC1-AS1Q9H2J1 176 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 RTEL1Q9NZ71 1219 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 MSRB2Q9Y3D2 182 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 PCDHGA5Q9Y5G8 931 aa9.01□□□□□ -0.97
LINC01961-201ENST00000449954 A0A0U1RQF3 1178 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 GIPC1O14908 333 aa9□□□□□ -0.97
LINC01961-201ENST00000449954 FOXP2O15409 715 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms