RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 AKAP12Q02952 1782 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 CEP290O15078 2479 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 GOLGA6L9A6NEM1 432 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 ALPPL2P10696 532 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 RNASE9P60153 205 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 SEPT6Q14141 434 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 SKIDA1Q1XH10 827 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 USP39Q53GS9 565 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 HABP4Q5JVS0 413 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 DENND2CQ68D51 928 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 SLC30A10Q6XR72 485 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 NRSN1Q8IZ57 195 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 ABCF3Q9NUQ8 709 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 STK17AQ9UEE5 414 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 KCNH3Q9ULD8 1083 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 PIK3C2AO00443 1686 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 EIF2B5Q13144 721 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 PPP2R5CQ13362 524 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 ORC2Q13416 577 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 OLFML2BQ68BL8 750 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 ISM2Q6H9L7 571 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 TATDN1Q6P1N9 297 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 NEK11Q8NG66 645 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 MAP3K14Q99558 947 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 DNAJC7Q99615 494 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 PCDH10Q9P2E7 1040 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 ANAPC4Q9UJX5 808 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 MAP1BP46821 2468 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 COL1A1P02452 1464 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 ATG13O75143 517 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 SMPD1P17405 629 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 CCND3P30281 292 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 MRPS6P82932 125 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 CREB5Q02930 508 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 TTC39CQ8N584 583 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 CASP10Q92851 521 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 TTC1Q99614 292 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 METTL14Q9HCE5 456 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 EPB41L4AQ9HCS5 686 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 CD207Q9UJ71 328 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 CDY2AQ9Y6F7 541 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 ACBD5Q5T8D3 534 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 SCYL2Q6P3W7 929 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 C17orf99Q6UX52 265 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 SENP7Q9BQF6 1050 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 MAGEF1Q9HAY2 307 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 JADE2Q9NQC1 790 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 TJP2Q9UDY2 1190 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 PLA2G4BP0C869 781 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 PTPN11Q06124 597 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 CTXN3Q4LDR2 81 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 PCNX4Q63HM2 1172 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZNF365Q70YC5 407 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 TAOK1Q7L7X3 1001 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 TNIP3Q96KP6 325 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 RSAD1Q9HA92 442 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 DONSONQ9NYP3 566 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 ARMCX3Q9UH62 379 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 KANSL1LA0AUZ9 987 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 TBX3O15119 743 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 THP07101 528 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 CFHP08603 1231 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 RPL10AP62906 217 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 PTPN14Q15678 1187 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 TMC5Q6UXY8 1006 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 LRRC43Q8N309 656 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 VGLL2Q8N8G2 317 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 FBXO18Q8NFZ0 1043 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 ARHGAP39Q9C0H5 1083 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 ASAH2Q9NR71 780 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 JAK2O60674 1132 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 SCNN1BP51168 640 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 FAM171A1Q5VUB5 890 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 ALYREFQ86V81 257 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 GABPB2Q8TAK5 448 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 HASPINQ8TF76 798 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 HERVK_113Q902F9 699 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 TIPINQ9BVW5 301 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 POLMQ9NP87 494 aaPredicted RBP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 TRAK2O60296 914 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 NPTXRO95502 500 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 SMIM10L2AP0DMW4 78 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 SMIM10L2BP0DMW5 78 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 MTHFRP42898 656 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 GPC3P51654 580 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 CSTF1Q05048 431 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 SEMA3FQ13275 785 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 CAVIN1Q6NZI2 390 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 OOSP2Q86WS3 158 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 GJD3Q8N144 294 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 MKL1Q969V6 931 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 CFAP36Q96G28 342 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 GDPD2Q9HCC8 539 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 PCDHB8Q9UN66 801 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 POLR2DO15514 142 aaKnown RBP6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 HMBSP08397 361 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 PGM5Q15124 567 aa6.06□□□□□ -1.44
CDC42BPA-209ENST00000448940 CYB5R4Q7L1T6 521 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms