RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 CTTNQ14247 550 aaKnown RBP14.8□□□□□ -0.04
HMGB3-204ENST00000448905 UBXN11Q5T124 520 aa14.8□□□□□ -0.04
HMGB3-204ENST00000448905 FLCNQ8NFG4 579 aa14.8□□□□□ -0.04
HMGB3-204ENST00000448905 HAS1Q92839 578 aa14.8□□□□□ -0.04
HMGB3-204ENST00000448905 DYDC2Q96IM9 177 aa14.8□□□□□ -0.04
HMGB3-204ENST00000448905 RPS6KC1Q96S38 1066 aa14.8□□□□□ -0.04
HMGB3-204ENST00000448905 MINDY3Q9H8M7 445 aa14.8□□□□□ -0.04
HMGB3-204ENST00000448905 FBXL21Q9UKT6 434 aa14.8□□□□□ -0.04
HMGB3-204ENST00000448905 GIT1Q9Y2X7 761 aa14.8□□□□□ -0.04
HMGB3-204ENST00000448905 ARL5CA6NH57 179 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 PROB1E7EW31 1015 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 STK25O00506 426 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 DGAT1O75907 488 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 C1RP00736 705 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 PTENP60484 403 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 SCRN1Q12765 414 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 KMT2EQ8IZD2 1858 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 CMASQ8NFW8 434 aaPredicted RBP14.79□□□□□ -0.04
HMGB3-204ENST00000448905 HDAC7Q8WUI4 952 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 NXPE3Q969Y0 559 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 CSRNP2Q9H175 543 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 KCNK12Q9HB15 430 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 BMP2KQ9NSY1 1161 aaPredicted RBP14.79□□□□□ -0.04
HMGB3-204ENST00000448905 ANKEF1Q9NU02 776 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 WRAP73Q9P2S5 460 aaPredicted RBP14.79□□□□□ -0.04
HMGB3-204ENST00000448905 ORC3Q9UBD5 711 aaPredicted RBP14.79□□□□□ -0.04
HMGB3-204ENST00000448905 PRG3Q9Y2Y8 225 aaPredicted RBP14.79□□□□□ -0.04
HMGB3-204ENST00000448905 IPPQ9Y573 584 aa14.79□□□□□ -0.04
HMGB3-204ENST00000448905 STK36Q9NRP7 1315 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 PFKFB2O60825 505 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 GLUD1P00367 558 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 XRCC6P12956 609 aaKnown RBP eCLIP14.78□□□□□ -0.04
HMGB3-204ENST00000448905 GBP2P32456 591 aaPredicted RBP14.78□□□□□ -0.04
HMGB3-204ENST00000448905 KRT2P35908 639 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 GLUD2P49448 558 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 AFF1P51825 1210 aaKnown RBP14.78□□□□□ -0.04
HMGB3-204ENST00000448905 CYP4A11Q02928 519 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 CREMQ03060 361 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 COLGALT2Q8IYK4 626 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 TMEM105Q8N8V8 129 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 SMG8Q8ND04 991 aaKnown RBP14.78□□□□□ -0.04
HMGB3-204ENST00000448905 GAD1Q99259 594 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 EIF2AK1Q9BQI3 630 aaKnown RBP14.78□□□□□ -0.04
HMGB3-204ENST00000448905 RTP3Q9BQQ7 232 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 VN1R3Q9BXE9 311 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 PLEKHA4Q9H4M7 779 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 PIDD1Q9HB75 910 aa14.78□□□□□ -0.04
HMGB3-204ENST00000448905 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.78□□□□□ -0.04
HMGB3-204ENST00000448905 TEX28O15482 410 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 TSPAN1O60635 241 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 TADA2AO75478 443 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 LYPLA2O95372 231 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 RFX1P22670 979 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 TRIM29Q14134 588 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 CALCRLQ16602 461 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 USP41Q3LFD5 358 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 KIAA0319Q5VV43 1072 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 POTEDQ86YR6 584 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 IFNLR1Q8IU57 520 aaPredicted RBP14.77□□□□□ -0.05
HMGB3-204ENST00000448905 GPR65Q8IYL9 337 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 OXER1Q8TDS5 423 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 HSD17B14Q9BPX1 270 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 HERC2P3Q9BVR0 1158 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 EIF2AQ9BY44 585 aaKnown RBP14.77□□□□□ -0.05
HMGB3-204ENST00000448905 NFKBIZQ9BYH8 718 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 RHOBTB2Q9BYZ6 727 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 TTC12Q9H892 705 aaPredicted RBP14.77□□□□□ -0.05
HMGB3-204ENST00000448905 RXFP1Q9HBX9 757 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 WDR6Q9NNW5 1121 aaKnown RBP14.77□□□□□ -0.05
HMGB3-204ENST00000448905 MAN1C1Q9NR34 630 aa14.77□□□□□ -0.05
HMGB3-204ENST00000448905 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.77□□□□□ -0.05
HMGB3-204ENST00000448905 DAXXQ9UER7 740 aaPredicted RBP14.77□□□□□ -0.05
HMGB3-204ENST00000448905 ZBTB39O15060 712 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 INPPL1O15357 1258 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 MLH1P40692 756 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 DSG1Q02413 1049 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 SLC27A1Q6PCB7 646 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 TAS1R1Q7RTX1 841 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 CPB2Q96IY4 423 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 APOL6Q9BWW8 343 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 SMOC2Q9H3U7 446 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 WNT16Q9UBV4 365 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 PARP2Q9UGN5 583 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 TPCN1Q9ULQ1 816 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 HES2Q9Y543 173 aa14.76□□□□□ -0.05
HMGB3-204ENST00000448905 B4GALT3O60512 393 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 EIF5BO60841 1220 aaKnown RBP14.75□□□□□ -0.05
HMGB3-204ENST00000448905 AOC1P19801 751 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 ARL2P36404 184 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 NBL1P41271 181 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 TXKP42681 527 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 SCNN1GP51170 649 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 ANAPC15P60006 121 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 DSC1Q08554 894 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 SPIRE1Q08AE8 756 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 PALB2Q86YC2 1186 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 SIX5Q8N196 739 aa14.75□□□□□ -0.05
HMGB3-204ENST00000448905 SMG7Q92540 1137 aaKnown RBP14.75□□□□□ -0.05
HMGB3-204ENST00000448905 NKD2Q969F2 451 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms