RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ARHGAP26Q9UNA1 814 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 DENND3A2RUS2 1198 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 ZNF185O15231 689 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 FCER1AP12319 257 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 NEK2P51955 445 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 SNAP25P60880 206 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 FLOT2Q14254 428 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 HIF1AQ16665 826 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 Q3C1V9 767 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 RC3H1Q5TC82 1133 aaKnown RBP8.25□□□□□ -1.09
NEDD9-204ENST00000448183 FRA10AC1Q70Z53 315 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 FAM167AQ96KS9 214 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 PRMT1Q99873 361 aaKnown RBP8.25□□□□□ -1.09
NEDD9-204ENST00000448183 COA1Q9GZY4 146 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 KIF9Q9HAQ2 790 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 DCP1AQ9NPI6 582 aaPredicted RBP8.25□□□□□ -1.09
NEDD9-204ENST00000448183 STXBP3O00186 592 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 ANP32DO95626 131 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 GH2P01242 217 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 TRIM49P0CI25 452 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 TRIM49CP0CI26 452 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 CHN1P15882 459 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 AP1B1Q10567 949 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 MED21Q13503 144 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 CUL3Q13618 768 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 OR9Q1Q8NGQ5 310 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 SGSM3Q96HU1 749 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 XPO6Q96QU8 1125 aaKnown RBP8.25□□□□□ -1.09
NEDD9-204ENST00000448183 CCSER1Q9C0I3 900 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 TEKT2Q9UIF3 430 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 STAP1Q9ULZ2 295 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 HPCAL4Q9UM19 191 aa8.25□□□□□ -1.09
NEDD9-204ENST00000448183 PITPNM2Q9BZ72 1349 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 HNRNPCL2B2RXH8 293 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 ARHGEF9O43307 516 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 P4HBP07237 508 aaKnown RBP8.24□□□□□ -1.09
NEDD9-204ENST00000448183 ASNSP08243 561 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 SRGNP10124 158 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 OSBPP22059 807 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 PRDX5P30044 214 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 CIITAP33076 1130 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 LSP1P33241 339 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 ARSEP51690 589 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 TNFAIP2Q03169 654 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 AGBL2Q5U5Z8 902 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 FAM196AQ6ZSG2 479 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 CATSPER4Q7RTX7 472 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 RAPGEF5Q92565 580 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 ASPSCR1Q9BZE9 553 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 TRIM9Q9C026 710 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 POLD4Q9HCU8 107 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 TMEM260Q9NX78 707 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 PDXKO00764 312 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 IL10P22301 178 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 SLC1A1P43005 524 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 FXR1P51114 621 aaKnown RBP eCLIP8.24□□□□□ -1.09
NEDD9-204ENST00000448183 IRX1P78414 480 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-204ENST00000448183 DNAL1Q4LDG9 190 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 DPY19L2Q6NUT2 758 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 RFX8Q6ZV50 586 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 CNPY4Q8N129 248 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 ULK4Q96C45 1275 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 AGPAT1Q99943 283 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 RANBP17Q9H2T7 1088 aaKnown RBP8.24□□□□□ -1.09
NEDD9-204ENST00000448183 CXorf56Q9H5V9 222 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 TOPORSQ9NS56 1045 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-204ENST00000448183 ABCF3Q9NUQ8 709 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 ZNF711Q9Y462 761 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 EMSYQ7Z589 1322 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 hCG_2014768A0A024R1R8 64 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 PIK3R2O00459 728 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 NMT2O60551 498 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 NFKBIAP25963 317 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 QARSP47897 775 aaKnown RBP8.24□□□□□ -1.09
NEDD9-204ENST00000448183 IRAK1P51617 712 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 DAB2P98082 770 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 TAP1Q03518 808 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 NSUN2Q08J23 767 aaKnown RBP eCLIP8.24□□□□□ -1.09
NEDD9-204ENST00000448183 ITPRIPL1Q6GPH6 555 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 KIAA1841Q6NSI8 718 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 SLC30A9Q6PML9 568 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 ADSSL1Q8N142 457 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 NDUFAF2Q8N183 169 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 RIN2Q8WYP3 895 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-204ENST00000448183 SNX19Q92543 992 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 ALKBH8Q96BT7 664 aaKnown RBP8.24□□□□□ -1.09
NEDD9-204ENST00000448183 MTBPQ96DY7 904 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 DTNBP1Q96EV8 351 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 PPP1R16BQ96T49 567 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 RMDN3Q96TC7 470 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 GGT7Q9UJ14 662 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 TUBE1Q9UJT0 475 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 EFCAB6Q5THR3 1501 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 PHF20L1A8MW92 1017 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 RTN2O75298 545 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 APOA1P02647 267 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 CCND1P24385 295 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 MARK3P27448 753 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 ARPP19P56211 112 aa8.24□□□□□ -1.09
NEDD9-204ENST00000448183 ACTR2P61160 394 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms