RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 H7C0C1 242 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 EIF2AK2P19525 551 aaKnown RBP11.98□□□□□ -0.49
ZNF550-204ENST00000447310 ATP5OP48047 213 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 GIT2Q14161 759 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 DNAJC24Q6P3W2 148 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 COL23A1Q86Y22 540 aaPredicted RBP11.98□□□□□ -0.49
ZNF550-204ENST00000447310 C4orf33Q8N1A6 199 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 SUPT20HQ8NEM7 779 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 MAML1Q92585 1016 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 KAT2BQ92831 832 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 RUSC1Q9BVN2 902 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 TRIM55Q9BYV6 548 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 KDM4CQ9H3R0 1056 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 BATF3Q9NR55 127 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 STOML1Q9UBI4 398 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 CFAP69A5D8W1 941 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 IPO5O00410 1097 aaKnown RBP11.98□□□□□ -0.49
ZNF550-204ENST00000447310 DDX3XO00571 662 aaKnown RBP eCLIP11.98□□□□□ -0.49
ZNF550-204ENST00000447310 RNF8O76064 485 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 CD58P19256 250 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 RFX1P22670 979 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 CCND1P24385 295 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 TNFRSF8P28908 595 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 SSTR3P32745 418 aaPredicted RBP11.98□□□□□ -0.49
ZNF550-204ENST00000447310 COILP38432 576 aaPredicted RBP11.98□□□□□ -0.49
ZNF550-204ENST00000447310 GPS1Q13098 491 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 NPY5RQ15761 445 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 CD302Q8IX05 232 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 ATL2Q8NHH9 583 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 GRAMD1AQ96CP6 724 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 BTBD6Q96KE9 485 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 CYTH2Q99418 400 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 TTYH3Q9C0H2 523 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 ALG13Q9NP73 1137 aaKnown RBP11.98□□□□□ -0.49
ZNF550-204ENST00000447310 GPR75-ASB3A0A0A6YYF3 556 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 COPS2P61201 443 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 CDR2Q01850 454 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 MKRN3Q13064 507 aaKnown RBP11.98□□□□□ -0.49
ZNF550-204ENST00000447310 ALCAMQ13740 583 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 ZNF394Q53GI3 561 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 KRT39Q6A163 491 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 YTHDF3Q7Z739 585 aaKnown RBP11.98□□□□□ -0.49
ZNF550-204ENST00000447310 ZBED8Q8IZ13 594 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 PDIK1LQ8N165 341 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 MREGQ8N565 214 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 RBM15Q96T37 977 aaKnown RBP eCLIP11.98□□□□□ -0.49
ZNF550-204ENST00000447310 MMTAG2Q9BU76 263 aaKnown RBP11.98□□□□□ -0.49
ZNF550-204ENST00000447310 CALN1Q9BXU9 219 aa11.98□□□□□ -0.49
ZNF550-204ENST00000447310 ZBED4O75132 1171 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 ITIH2P19823 946 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 PTENP60484 403 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 PPP2R5DQ14738 602 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 HAUS6Q7Z4H7 955 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 SLC13A5Q86YT5 568 aaPredicted RBP11.97□□□□□ -0.49
ZNF550-204ENST00000447310 PAF1Q8N7H5 531 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 FAM81BQ96LP2 452 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 ROPN1BQ9BZX4 212 aaPredicted RBP11.97□□□□□ -0.49
ZNF550-204ENST00000447310 RIOX1Q9H6W3 641 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 ROPN1Q9HAT0 212 aaPredicted RBP11.97□□□□□ -0.49
ZNF550-204ENST00000447310 ADAMTS3O15072 1205 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 SKAP2O75563 359 aaPredicted RBP11.97□□□□□ -0.49
ZNF550-204ENST00000447310 NQO1P15559 274 aaKnown RBP11.97□□□□□ -0.49
ZNF550-204ENST00000447310 POLR2BP30876 1174 aaKnown RBP11.97□□□□□ -0.49
ZNF550-204ENST00000447310 CRKP46108 304 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 SWT1Q5T5J6 900 aaKnown RBP11.97□□□□□ -0.49
ZNF550-204ENST00000447310 NT5DC3Q86UY8 548 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 RFX6Q8HWS3 928 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 STAMBPL1Q96FJ0 436 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 TRAIPQ9BWF2 469 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 TRABDQ9H4I3 376 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 SEPT9Q9UHD8 586 aaPredicted RBP11.97□□□□□ -0.49
ZNF550-204ENST00000447310 PI4K2BG5E9Z4 385 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 MAP3K7O43318 606 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 ITGA8P53708 1063 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 POLGP54098 1239 aaPredicted RBP11.97□□□□□ -0.49
ZNF550-204ENST00000447310 NR1H3Q13133 447 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 DNAJC3Q13217 504 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 RASA3Q14644 834 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 STAT4Q14765 748 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 RFX8Q6ZV50 586 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 ZSWIM1Q9BR11 485 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 GOLGA8RI6L899 631 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 TJP3O95049 919 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 ATP6V1G2O95670 118 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 RARGP13631 454 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 SERPINB6P35237 376 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 PDIA2Q13087 525 aaKnown RBP11.97□□□□□ -0.49
ZNF550-204ENST00000447310 EPC2Q52LR7 807 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 TMEM270Q6UE05 265 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 MCF2L2Q86YR7 1114 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 ATG4AQ8WYN0 398 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 MTMR9Q96QG7 549 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 PURBQ96QR8 312 aaKnown RBP11.97□□□□□ -0.49
ZNF550-204ENST00000447310 KLHL11Q9NVR0 708 aa11.97□□□□□ -0.49
ZNF550-204ENST00000447310 TBX3O15119 743 aa11.96□□□□□ -0.49
ZNF550-204ENST00000447310 PPIP5K2O43314 1243 aa11.96□□□□□ -0.49
ZNF550-204ENST00000447310 HAUS5O94927 633 aa11.96□□□□□ -0.49
ZNF550-204ENST00000447310 CPP00450 1065 aa11.96□□□□□ -0.49
ZNF550-204ENST00000447310 ITIH4Q14624 930 aa11.96□□□□□ -0.49
ZNF550-204ENST00000447310 RINT1Q6NUQ1 792 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms