RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TLE6Q9H808 572 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 TBC1D17Q9HA65 648 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 RC3H2Q9HBD1 1191 aaKnown RBP6.14□□□□□ -1.43
SDCBP-205ENST00000447267 DDX49Q9Y6V7 483 aaKnown RBP6.14□□□□□ -1.43
SDCBP-205ENST00000447267 C5orf67F2Z3F1 127 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 ZEB2O60315 1214 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 CXCL10P02778 98 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 MMP1P03956 469 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 RB1P06400 928 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 MYL3P08590 195 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 TECP42680 631 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 TMEM132BQ14DG7 1078 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 LMBR1LQ6UX01 489 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 MAMDC4Q6UXC1 1216 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 TLK2Q86UE8 772 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 PROSER1Q86XN7 944 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 FIBCD1Q8N539 461 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 ZBTB44Q8NCP5 570 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 RIN3Q8TB24 985 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 ATP8B4Q8TF62 1192 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 PPP2R3CQ969Q6 453 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 NEK1Q96PY6 1258 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 TANGO6Q9C0B7 1094 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 FAM8A1Q9UBU6 413 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 SIT1Q9Y3P8 196 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 PCDHB5Q9Y5E4 795 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 PCDHGA2Q9Y5H1 932 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 MAPK8IP3Q9UPT6 1336 aa6.13□□□□□ -1.43
SDCBP-205ENST00000447267 ITPR1Q14643 2758 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 ELL2O00472 640 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-205ENST00000447267 SPTA1P02549 2419 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 CAPNS1P04632 268 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 RIPPLY3P57055 190 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 RAB3GAP1Q15042 981 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 CSRP2Q16527 193 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 CCDC57Q2TAC2 916 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 KIAA1755Q5JYT7 1200 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 SNRNP48Q6IEG0 339 aaKnown RBP6.12□□□□□ -1.43
SDCBP-205ENST00000447267 ANKRD54Q6NXT1 300 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 LRRC8DQ7L1W4 858 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 DBF4BQ8NFT6 615 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 SPPL3Q8TCT6 385 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 DHX38Q92620 1227 aaKnown RBP6.12□□□□□ -1.43
SDCBP-205ENST00000447267 FOXQ1Q9C009 403 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 KATNBL1Q9H079 304 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 ABHD16BQ9H3Z7 469 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 MYO10Q9HD67 2058 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 GPR108Q9NPR9 543 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 PDGFCQ9NRA1 345 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 SPATA6Q9NWH7 488 aaPredicted RBP6.12□□□□□ -1.43
SDCBP-205ENST00000447267 ZSCAN32Q9NX65 697 aa6.12□□□□□ -1.43
SDCBP-205ENST00000447267 HERC5Q9UII4 1024 aaKnown RBP6.12□□□□□ -1.43
SDCBP-205ENST00000447267 MYO9AB2RTY4 2548 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 TEX15Q9BXT5 2789 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 PRAMEF27A3QJZ7 478 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 CHL1O00533 1208 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 LAMTOR5O43504 91 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 SLC25A27O95847 323 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 ITGB1P05556 798 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 RETP07949 1114 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 MCAMP43121 646 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 NOVA1P51513 510 aaKnown RBP6.11□□□□□ -1.43
SDCBP-205ENST00000447267 USP14P54578 494 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 TDGQ13569 410 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 LRRC14Q15048 493 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 SF3A2Q15428 464 aaKnown RBP6.11□□□□□ -1.43
SDCBP-205ENST00000447267 LRRFIP1Q32MZ4 808 aaKnown RBP6.11□□□□□ -1.43
SDCBP-205ENST00000447267 ZNF528Q3MIS6 628 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 AASDHQ4L235 1098 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-205ENST00000447267 ZNF648Q5T619 568 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-205ENST00000447267 KSR2Q6VAB6 950 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 ARMCX2Q7L311 632 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 ATG4DQ86TL0 474 aaPredicted RBP6.11□□□□□ -1.43
SDCBP-205ENST00000447267 ZDHHC14Q8IZN3 488 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 MSL3Q8N5Y2 521 aaKnown RBP6.11□□□□□ -1.43
SDCBP-205ENST00000447267 MICAL1Q8TDZ2 1067 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 AFAP1L1Q8TED9 768 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 TOP1MTQ969P6 601 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 ELMO3Q96BJ8 720 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 DDX11Q96FC9 970 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 CFAP53Q96M91 514 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 CTAGE1Q96RT6 745 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 TRAIPQ9BWF2 469 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 KIAA1683Q9H0B3 1180 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 BABAM1Q9NWV8 329 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 PI4KBQ9UBF8 816 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 KLK13Q9UKR3 277 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 CYP8B1Q9UNU6 501 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 SAMM50Q9Y512 469 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 SNX11Q9Y5W9 270 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 DMXL2Q8TDJ6 3036 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 ZNF236Q9UL36 1845 aa6.11□□□□□ -1.43
SDCBP-205ENST00000447267 ENO4A6NNW6 628 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 EFCAB14O75071 495 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 DDX58O95786 925 aaKnown RBP6.1□□□□□ -1.43
SDCBP-205ENST00000447267 GNA15P30679 374 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 PLCD1P51178 756 aa6.1□□□□□ -1.43
SDCBP-205ENST00000447267 PURAQ00577 322 aaKnown RBP6.1□□□□□ -1.43
SDCBP-205ENST00000447267 HNRNPUQ00839 825 aaKnown RBP eCLIP6.1□□□□□ -1.43
SDCBP-205ENST00000447267 NEXNQ0ZGT2 675 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms