RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 FTCDO95954 541 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 KIF22Q14807 665 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 FAM160B1Q5W0V3 765 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 GPD1LQ8N335 351 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 SLC10A4Q96EP9 437 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 RAB21Q9UL25 225 aa18.92■□□□□ 0.62
SMC6-206ENST00000446852 LRRIQ4A6NIV6 560 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 NAMPTP43490 491 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 MAP1SQ66K74 1059 aaPredicted RBP18.91■□□□□ 0.62
SMC6-206ENST00000446852 TRIM50Q86XT4 487 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 TMC2Q8TDI7 906 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 MPHOSPH6Q99547 160 aaKnown RBP18.91■□□□□ 0.62
SMC6-206ENST00000446852 GPR20Q99678 358 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 FAM213AQ9BRX8 229 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 EFCC1Q9HA90 598 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 TCP1P17987 556 aaKnown RBP18.91■□□□□ 0.62
SMC6-206ENST00000446852 RFC5P40937 340 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 DRP2Q13474 957 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 TMEM63BQ5T3F8 832 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 KRT39Q6A163 491 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 PNMA8AQ86V59 439 aaPredicted RBP18.91■□□□□ 0.62
SMC6-206ENST00000446852 KCNN1Q92952 543 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 RPGRIP1Q96KN7 1286 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 TMEM8AQ9HCN3 771 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 NRBP2Q9NSY0 501 aa18.91■□□□□ 0.62
SMC6-206ENST00000446852 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
SMC6-206ENST00000446852 CCDC151A5D8V7 595 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 LIG4P49917 911 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 CELF3Q5SZQ8 465 aaKnown RBP18.9■□□□□ 0.62
SMC6-206ENST00000446852 PALB2Q86YC2 1186 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 FAM84AQ96KN4 292 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 HAPLN2Q9GZV7 340 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 FAM53CQ9NYF3 392 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 EHD2Q9NZN4 543 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 OGFRQ9NZT2 677 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 CLEC11AQ9Y240 323 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 COQ4Q9Y3A0 265 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 EDN1P05305 212 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 H2AFZP0C0S5 128 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 ABCD1P33897 745 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 CBX1P83916 185 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 MEI1Q5TIA1 1274 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 CCDC62Q6P9F0 684 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 H2AFVQ71UI9 128 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 FMNL3Q8IVF7 1028 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 DEPTORQ8TB45 409 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 TAS1R2Q8TE23 839 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 MORC4Q8TE76 937 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 KREMEN1Q96MU8 473 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 SMARCAL1Q9NZC9 954 aa18.9■□□□□ 0.62
SMC6-206ENST00000446852 PACSIN2Q9UNF0 486 aaPredicted RBP18.9■□□□□ 0.62
SMC6-206ENST00000446852 CCDC172P0C7W6 258 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 DLATP10515 647 aaKnown RBP18.89■□□□□ 0.61
SMC6-206ENST00000446852 MARK3P27448 753 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 VSNL1P62760 191 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 C2orf54Q08AI8 447 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 STRN3Q13033 797 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 CAPSQ13938 189 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 BRD3Q15059 726 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 KCNV1Q6PIU1 500 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 ZNF572Q7Z3I7 529 aaPredicted RBP18.89■□□□□ 0.61
SMC6-206ENST00000446852 SLC20A1Q8WUM9 679 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 COPS5Q92905 334 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 GOLPH3Q9H4A6 298 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 KCNG1Q9UIX4 513 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 STYXL1Q9Y6J8 313 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 MAFO75444 373 aaPredicted RBP18.89■□□□□ 0.61
SMC6-206ENST00000446852 GALCP54803 685 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 SHCBP1Q8NEM2 672 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 AZI2Q9H6S1 392 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 PDGFCQ9NRA1 345 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 TSKSQ9UJT2 592 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 INTUQ9ULD6 942 aa18.89■□□□□ 0.61
SMC6-206ENST00000446852 TMCO5BA8MYB1 307 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 ZBTB42B2RXF5 422 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 K7ERI5 159 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 EXTL3O43909 919 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 LGR5O75473 907 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 TBC1D8O95759 1140 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 GPC3P51654 580 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 WNT7BP56706 349 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 SV2AQ7L0J3 742 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 PPM1KQ8N3J5 372 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 LRRC57Q8N9N7 239 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 GLG1Q92896 1179 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 ELMO3Q96BJ8 720 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 ZBTB45Q96K62 511 aaPredicted RBP18.88■□□□□ 0.61
SMC6-206ENST00000446852 ARFGAP3Q9NP61 516 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 PNMA3Q9UL41 463 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 FAM170AA1A519 330 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 NOP56O00567 594 aaKnown RBP18.88■□□□□ 0.61
SMC6-206ENST00000446852 PIGRP01833 764 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 DNA2P51530 1060 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 NLRP11P59045 1033 aaKnown RBP18.88■□□□□ 0.61
SMC6-206ENST00000446852 MKRN3Q13064 507 aaKnown RBP18.88■□□□□ 0.61
SMC6-206ENST00000446852 FBXL13Q8NEE6 735 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 MS4A4AQ96JQ5 239 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 TAS2R14Q9NYV8 317 aa18.88■□□□□ 0.61
SMC6-206ENST00000446852 EVPLQ92817 2033 aa18.87■□□□□ 0.61
SMC6-206ENST00000446852 ZNF233A6NK53 670 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms