RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	IQCD	Q96DY2	449 aa		7.26	□□□□□ -1.25
TRIM6-205	ENST00000445329	PANX2	Q96RD6	677 aa		7.26	□□□□□ -1.25
TRIM6-205	ENST00000445329	QTRT2	Q9H974	415 aa	Known RBP	7.26	□□□□□ -1.25
TRIM6-205	ENST00000445329	SIAE	Q9HAT2	523 aa		7.26	□□□□□ -1.25
TRIM6-205	ENST00000445329	TCP11L1	Q9NUJ3	509 aa		7.26	□□□□□ -1.25
TRIM6-205	ENST00000445329	SPATA31A1	Q5TZJ5	1347 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	SHANK3	Q9BYB0	1731 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	FUOM	A2VDF0	154 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	CPLX1	O14810	134 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	ZKSCAN1	P17029	563 aa	Predicted RBP	7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	PRKCI	P41743	596 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	CDK7	P50613	346 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	ADK	P55263	362 aa	Known RBP	7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	KPNB1	Q14974	876 aa	Known RBP	7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	SF3B4	Q15427	424 aa	Known RBP eCLIP	7.25	□□□□□ -1.25	5e-8	■■■■□ 21.4
TRIM6-205	ENST00000445329	TNNI3K	Q59H18	835 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	TPTE2	Q6XPS3	522 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	BARGIN	Q6ZT62	677 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	ZBED8	Q8IZ13	594 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	LARGE2	Q8N3Y3	721 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	CAGE1	Q8TC20	777 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	RAPGEF5	Q92565	580 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	FBXL18	Q96ME1	805 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	NUDCD1	Q96RS6	583 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	MMS19	Q96T76	1030 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	CCDC77	Q9BR77	488 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	WASH6P	Q9NQA3	447 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	TRNAU1AP	Q9NX07	287 aa	Known RBP	7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	CYP39A1	Q9NYL5	469 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	USP21	Q9UK80	565 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	VANGL2	Q9ULK5	521 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	COQ6	Q9Y2Z9	468 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	PCDHGA11	Q9Y5H2	935 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	AFF2	P51816	1311 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	ZNF233	A6NK53	670 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329		A6NL46	340 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	IFIT3	O14879	490 aa	Known RBP	7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	OR5F1	O95221	314 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	LYN	P07948	512 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	DRD4	P21917	467 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	RGS2	P41220	211 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	ZNF135	P52742	658 aa	Predicted RBP	7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	PPP2R2B	Q00005	443 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	PFKP	Q01813	784 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	KDSR	Q06136	332 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	KLHL38	Q2WGJ6	581 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	SPOPL	Q6IQ16	392 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	NUP93	Q8N1F7	819 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	RAPGEF4	Q8WZA2	1011 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	DPF2	Q92785	391 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	PGBD1	Q96JS3	809 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	CCDC43	Q96MW1	224 aa	Known RBP	7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	NAP1L4	Q99733	375 aa	Known RBP	7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	RNF38	Q9H0F5	515 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	ARMC7	Q9H6L4	198 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	ZNF287	Q9HBT7	754 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	GGT7	Q9UJ14	662 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	SLC8A2	Q9UPR5	921 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	SPATA31A5	Q5VU36	1347 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	SPATA31A7	Q8IWB4	1347 aa		7.25	□□□□□ -1.25
TRIM6-205	ENST00000445329	MYH13	Q9UKX3	1938 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	GTPBP10	A4D1E9	387 aa	Known RBP	7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	CCDC160	A6NGH7	325 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	BTBD19	C9JJ37	291 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	EXTL3	O43909	919 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	PEX11A	O75192	247 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	ARHGEF15	O94989	841 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	ATP1A3	P13637	1013 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	GYS1	P13807	737 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	TAT	P17735	454 aa	Predicted RBP	7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	MYL6	P60660	151 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	PPP2R5C	Q13362	524 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	STK38	Q15208	465 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	MOG	Q16653	247 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	CWF19L2	Q2TBE0	894 aa	Known RBP	7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	CCDC58	Q4VC31	144 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	ZCWPW2	Q504Y3	356 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	B3GNT6	Q6ZMB0	384 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	RUFY3	Q7L099	469 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	LRRTM3	Q86VH5	581 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	VSTM4	Q8IW00	320 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	ST13P4	Q8IZP2	240 aa	Predicted RBP	7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	MDM1	Q8TC05	714 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	DACT3	Q96B18	629 aa	Predicted RBP	7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	TSNARE1	Q96NA8	513 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	KIAA1683	Q9H0B3	1180 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	RAB17	Q9H0T7	212 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	LGR6	Q9HBX8	967 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	SIRT5	Q9NXA8	310 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	TSKS	Q9UJT2	592 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	WNK3	Q9BYP7	1800 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	PKD1L3	Q7Z443	1732 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	OVOS2	A0A0G2JMS6	1433 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	DISP2	A7MBM2	1401 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	GOLGA8B	A8MQT2	603 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	ERVV-2	B6SEH9	535 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329		F8W031	263 aa	Predicted RBP	7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329		H7C0C1	242 aa		7.24	□□□□□ -1.25
TRIM6-205	ENST00000445329	PFDN6	O15212	129 aa		7.24	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms