RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 ATP11CQ8NB49 1132 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 TRABDQ9H4I3 376 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.59■□□□□ 0.25
CDH23-207ENST00000442677 C16orf96A6NNT2 1141 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 GPATCH4Q5T3I0 446 aaKnown RBP16.59■□□□□ 0.25
CDH23-207ENST00000442677 HEATR6Q6AI08 1181 aaKnown RBP16.59■□□□□ 0.25
CDH23-207ENST00000442677 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 K7ERI5 159 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 DGKIO75912 1065 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 WASHC5Q12768 1159 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 TRIM16LQ309B1 348 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 IFNEQ86WN2 208 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 NDUFAF2Q8N183 169 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 MYO1DO94832 1006 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 PCP11498 1178 aaKnown RBP16.59■□□□□ 0.25
CDH23-207ENST00000442677 CHRNA3P32297 505 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 RUNX1T1Q06455 604 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 NAALADL2Q58DX5 795 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 ZSWIM5Q9P217 1185 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 CUL4AQ13619 759 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 TRIP10Q15642 601 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 TBC1D9BQ66K14 1250 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 OR6P1Q8NGX9 317 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 KLHL25Q9H0H3 589 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 SESN1Q9Y6P5 492 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 THOC2Q8NI27 1593 aaKnown RBP16.59■□□□□ 0.25
CDH23-207ENST00000442677 TAS2R42Q7RTR8 314 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 ANTXR1Q9H6X2 564 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 IL1RL2Q9HB29 575 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 KLHL11Q9NVR0 708 aa16.59■□□□□ 0.25
CDH23-207ENST00000442677 CIITAP33076 1130 aa16.58■□□□□ 0.25
CDH23-207ENST00000442677 TUBGCP3Q96CW5 907 aa16.58■□□□□ 0.25
CDH23-207ENST00000442677 BHMT2Q9H2M3 363 aa16.58■□□□□ 0.25
CDH23-207ENST00000442677 WDR48Q8TAF3 677 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 OTUB1Q96FW1 271 aaPredicted RBP16.58■□□□□ 0.24
CDH23-207ENST00000442677 KDM4CQ9H3R0 1056 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 HPCAL4Q9UM19 191 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 CYP2D7A0A087X1C5 515 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 EIF3HO15372 352 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDH23-207ENST00000442677 TNFAIP1Q13829 316 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 STXBP2Q15833 593 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 PDXDC2PQ6P474 469 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 PPP1R37O75864 691 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 KCNH2Q12809 1159 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 MKRN4PQ13434 485 aaPredicted RBP16.58■□□□□ 0.24
CDH23-207ENST00000442677 UBE3CQ15386 1083 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 TEX2Q8IWB9 1127 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 ACAP3Q96P50 834 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 C10orf88Q9H8K7 445 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 ZNF556Q9HAH1 456 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 USP15Q9Y4E8 981 aaPredicted RBP16.58■□□□□ 0.24
CDH23-207ENST00000442677 TCF3P15923 654 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 MRPL1Q9BYD6 325 aaKnown RBP16.58■□□□□ 0.24
CDH23-207ENST00000442677 CNGB3Q9NQW8 809 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 PCDHGB4Q9UN71 923 aa16.58■□□□□ 0.24
CDH23-207ENST00000442677 HORMAD1Q86X24 394 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 KRT87PA6NCN2 255 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 CYTH3O43739 400 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 OSBPL10Q9BXB5 764 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 WDR17Q8IZU2 1322 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 PDE5AO76074 875 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 MKRN3Q13064 507 aaKnown RBP16.57■□□□□ 0.24
CDH23-207ENST00000442677 DHX40Q8IX18 779 aaKnown RBP16.57■□□□□ 0.24
CDH23-207ENST00000442677 MAGEB5Q9BZ81 275 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 GEMIN8Q9NWZ8 242 aaKnown RBP16.57■□□□□ 0.24
CDH23-207ENST00000442677 ANO9A1A5B4 782 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 CCND1P24385 295 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 TFDP2Q14188 446 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 ARHGAP17Q68EM7 881 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 THNSL1Q8IYQ7 743 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 STAG2Q8N3U4 1231 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 RIN2Q8WYP3 895 aaPredicted RBP16.57■□□□□ 0.24
CDH23-207ENST00000442677 CAAP1Q9H8G2 361 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 PSAPP07602 524 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 KRT7P08729 469 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 SYDE2Q5VT97 1194 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 FAM162AQ96A26 154 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 CCDC134Q9H6E4 229 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 USP17L3A6NCW0 530 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 USP17L4A6NCW7 530 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 ASAP2O43150 1006 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 SURF1Q15526 300 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 ZNF699Q32M78 642 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 ZNF667Q5HYK9 610 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 THEMIS2Q5TEJ8 643 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 RNF219Q5W0B1 726 aaPredicted RBP16.57■□□□□ 0.24
CDH23-207ENST00000442677 USP17L1Q7RTZ2 530 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 AGGF1Q8N302 714 aaeCLIP16.57■□□□□ 0.24
CDH23-207ENST00000442677 SH3KBP1Q96B97 665 aa16.57■□□□□ 0.24
CDH23-207ENST00000442677 MRPS26Q9BYN8 205 aaKnown RBP16.57■□□□□ 0.24
CDH23-207ENST00000442677 FAM187AA6NFU0 413 aa16.56■□□□□ 0.24
CDH23-207ENST00000442677 PLEKHA8P1O95397 391 aa16.56■□□□□ 0.24
CDH23-207ENST00000442677 TRPM8Q7Z2W7 1104 aa16.56■□□□□ 0.24
CDH23-207ENST00000442677 RIN3Q8TB24 985 aa16.56■□□□□ 0.24
CDH23-207ENST00000442677 ERP27Q96DN0 273 aa16.56■□□□□ 0.24
CDH23-207ENST00000442677 VPS50Q96JG6 964 aa16.56■□□□□ 0.24
CDH23-207ENST00000442677 GCNAQ96QF7 691 aa16.56■□□□□ 0.24
CDH23-207ENST00000442677 SLC40A1Q9NP59 571 aa16.56■□□□□ 0.24
CDH23-207ENST00000442677 POLIQ9UNA4 740 aa16.56■□□□□ 0.24
CDH23-207ENST00000442677 ITSN2Q9NZM3 1697 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms